Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma03g01140 | ATGACTACTCAGACCCAAGAGGAGCTTCTTGCTCAACATCTCGAACAGCAAAAGATCCATgatgatgaacctgtcgtcgaggatgataatgatgaggaagaggatgatgatgatgatgaggatgacgaggatgatgaccatgccgacgGACTAGAAGGTGATGCATCTGGTAGGTCCAAGCAGACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTTAAACTTGGAATGAAACCTGTAACAGGTGTCAGCCGAGTGACGGTCAAGAAGAGCAAGAATATCCTGTTCGTCATCTCAAAACCAGACGTTTTCAAGAGTCCAACGTCTGACACGTACATTATATTTGGGGAAGCCAAGATTGAAGACTTGAGCTCACAGCTACAAACTCAGGCAGCAGAGCAATTCAAGGCTCCTAATTTGAGCAATGTTGGATCAAAGCCTGAATCTTCTGCTGTTGCTCAAGATGATGAGGAAGTGGATGAGGCTGGTGTAGATCCCAAGGACATAGAGTTGGTGATGACTCAAGCTGGCGTGTCAAGACCTAAAGCCGTTAAAGCTCTCAAGGCGGCCGGTGGTGACATTGTTGCTGCCATTATGGAGTTAACTAATTAA | 612 | 0.3922 | MTTQTQEELLAQHLEQQKIHDDEPVVEDDNDEEEDDDDDEDDEDDDHADGLEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNVGSKPESSAVAQDDEEVDEAGVDPKDIELVMTQAGVSRPKAVKALKAAGGDIVAAIMELTN | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma03g01140 | 203 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
| Gma03g01140 | 203 | PANTHER | NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED | 3 | 203 | IPR016641 | GO:0005854 | |
| Gma03g01140 | 203 | Pfam | NAC domain | 65 | 120 | IPR002715 | - | |
| Gma03g01140 | 203 | MobiDBLite | consensus disorder prediction | 51 | 72 | - | - | |
| Gma03g01140 | 203 | Pfam | HYPK UBA domain | 164 | 202 | IPR044034 | - | |
| Gma03g01140 | 203 | CDD | UBA_NACA_NACP1 | 157 | 202 | - | - | |
| Gma03g01140 | 203 | ProSiteProfiles | NAC A/B domain profile. | 62 | 127 | IPR002715 | - | |
| Gma03g01140 | 203 | SMART | NAC_2 | 65 | 121 | IPR002715 | - | |
| Gma03g01140 | 203 | MobiDBLite | consensus disorder prediction | 25 | 50 | - | - | |
| Gma03g01140 | 203 | MobiDBLite | consensus disorder prediction | 139 | 166 | - | - | |
| Gma03g01140 | 203 | Gene3D | - | 164 | 201 | - | - | |
| Gma03g01140 | 203 | Gene3D | - | 71 | 124 | IPR038187 | - | |
| Gma03g01140 | 203 | PANTHER | NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN | 3 | 203 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma03g01140 | Gma-Chr3 | 36668102 | 36670556 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma03g01140 | K03626 | - | gmx:100500056 | 324.324 |