Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01127 ATGGTTGAGAATAGAAATCCGCAAATGGGGGATTCTCCTTCTGGCAATGCGGGTCACAGACAAAGAAGGCTCTATCAAGTTTGGAGGGGAGGCAACAAGTTTTTCTGTGGTGGGAGGCTGGTTTTTGGTCCGGATGTAGCTTCACTGTTTCTTACAACATTCCTAATTGCTGGACCTGCAATTGCATTTTGTGTAAAGATATATCTTAAAATCAAGAAGACCGATGATCTTATTCATGATTACTGGTTTCCTGTATTGATTGTGGGTTTAGTTCTCACTGTTTTGGATTTAGTGTTCCTCCTTTTGACTTCTGGGAGAGATCCTGGAATTGTCCCTAGAAACTCACGACCTCCTGAATTTGATGAGACATTTGATATACCTACCCCTTCCATGGAGTGGATTAATGGCACAACCCCTCATTTGAAACTACCTCGAACTAAAGATATTGTTGTTAATGGTCACATAGTGAAAGTAAAGTTCTGTAATACATGCTTGCTTTATCGTCCTCCTCGTACTTCTCATTGTTCTATATGCGACAATTGTGTCCAGAGATTTGATCATCACTGTCCCTGGGTTGGCCAGTGCATTGGAATACGAAACTATCGGTACTTCTTCATGTTTATTTCGACATCAACCATTTTGTGCATATATGTCTTCTCGTTCTCTTGTATCAATATTGCCCGCAGTGGTGTTTGGAGGACAATAACACATGATTATGTATCAGATTTTCTGATAGTATACTGCTTCATAGCTGTCTGGTTTGTTGGTGGCCTCACAGCTTTCCATTTCTATCTCATTTGTACAAATCAGACAACTTACGAGAACTTCCGAAATCAATATGATAAGAAGGGGAACCCATTCAATAGGGGATCATGCAGAAATCTGAAAGAAACACTTTGTTCCAGTATTCCCCATTCGAAGAATAATTTCCGATCATTTGTTGTGGAGGATGAACAGATGATGGTTGGGTCTCTGACTCCAAATACTGGGGATGGAATTTTGACCCCAAAGGAGAAAATTGATCTTGAAATGGGATCTATGCGTGCAGAAGATGGTCGTAGGCCTGTTCCTGAACTTCTGCGAAATTTTGATTTTGATAATTTTGATAGTGACATGAAGTTTGCAGATGATGACGGGCAGCCTTCTTTTGATCCATTCTACAGTATTGAGGATGATGTAAAAGACTCGGCCCGAACATCCATTCAAACAGTTTTGAATTTCCAAAGCATAACTGAAGATGTAATGGAAGAGTCTGTGCAAAGCTCCCATGCTGGAGGAAAACCACGATGCAACCTTTTGGTTTCTAATGCAAAGAGGTTTGTTGATGGTCTTCTCTTTGATTGCTTGTGTGCCTTGAATTACACACTGAGGATAGTTTGGTTCCATAGTTGCAGCAATTTGTGGTTTGTAAGAAATTTCCAATTTGCTGACTCATGCAAGTTCATTGATGCTATTCATGCTGGAAATGGGGAGATTGACCCTACACTTCTCTCTAATTTTAGCATAAAAAGTGTGGCAAGTGTTTGTTGTAAGCTGTAA 1539 0.4022 MVENRNPQMGDSPSGNAGHRQRRLYQVWRGGNKFFCGGRLVFGPDVASLFLTTFLIAGPAIAFCVKIYLKIKKTDDLIHDYWFPVLIVGLVLTVLDLVFLLLTSGRDPGIVPRNSRPPEFDETFDIPTPSMEWINGTTPHLKLPRTKDIVVNGHIVKVKFCNTCLLYRPPRTSHCSICDNCVQRFDHHCPWVGQCIGIRNYRYFFMFISTSTILCIYVFSFSCINIARSGVWRTITHDYVSDFLIVYCFIAVWFVGGLTAFHFYLICTNQTTYENFRNQYDKKGNPFNRGSCRNLKETLCSSIPHSKNNFRSFVVEDEQMMVGSLTPNTGDGILTPKEKIDLEMGSMRAEDGRRPVPELLRNFDFDNFDSDMKFADDDGQPSFDPFYSIEDDVKDSARTSIQTVLNFQSITEDVMEESVQSSHAGGKPRCNLLVSNAKRFVDGLLFDCLCALNYTLRIVWFHSCSNLWFVRNFQFADSCKFIDAIHAGNGEIDPTLLSNFSIKSVASVCCKL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01127 512 PANTHER S-ACYLTRANSFERASE 21 363 - -
Gma03g01127 512 Pfam DHHC palmitoyltransferase 159 278 IPR001594 GO:0016409
Gma03g01127 512 ProSiteProfiles DHHC domain profile. 159 209 - -
Gma03g01127 512 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 21 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01127 Gma-Chr3 36459920 36466375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01127 84 301 Lipid Metabolism Gene Families AT4G22750 28.216 1.49e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01127 - - gmx:100779696 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01127 03 36459920 36466375 Gma03g01127 03 36459920 36466375 ECH
Gma19g01189 19 40538976 40545893 Gma03g01127 03 36459920 36466375 GST