Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01125 ATGCTCCTCCTTAGTCCTCCTCAGCCTCAACTTCAACCTTTCTTCACTTCCCTTCACATGGCAGCTCTTGTGAAACCAATTTCCAATGTCACTCCCAAATTTGTCAGCAGCCCCAGAATGGGCTCATCACACTCCTCCAAATTCAGCACCATAATAAGAATGTCTGCCACTGCCACCCCACCACCATCCACCTCCACAAAGCCAGCAAGCAGCAAGAAGGGCAATATCAAGGAGACCCTCTTGACTCCAAGATTCTACACCACTGACTTTGATGAGATGGAGACACTCTTCAACACTGAGATCAACAAAAACCTCAACCAGGATGAGTTTGAGGCACTGCTCCAGGAGTTCAAGACTGACTACAACCAGACACACTTTGTCAGGAACAAGGAGTTCAAGGAAGCCGCTGACAAACTTGAGGGTCCCCTCAGACAGATCTTTGTGGAGTTCCTTGAGAGGTCCTGCACTGCTGAATTCTCTGGCTTCCTTCTCTACAAAGAGCTTGGAAGGAGGCTAAAGAAAACCAACCCTGTGGTGGCTGAGATTTTCTCACTGATGTCTAGGGATGAAGCCAGGCATGCTGGGTTTTTGAACAAGGGTTTATCTGATTTCAATTTGGCTCTGGACTTGGGTTTCTTGACCAAAGCTAGAAAATACACATTTTTCAAGCCAAAGTTTATCTTCTATGCTACATACTTGTCTGAGAAAATTGGGTACTGGAGATACATAACCATATACAGACATCTCAAGGCCAACCCTGAGTTTCAATGTTATCCCATTTTTAAGTACTTTGAGAACTGGTGCCAGGATGAGAACAGACATGGAGATTTCTTCTCTGCCCTGATGAAGGCACAGCCACAATTTCTAAATGACTGGAAGGCAAAGTTGTGGTCTCGATTCTTCTGTCTATCGGTTTATGTCACAATGTATCTCAATGATTGCCAACGTACAGCTTTCTACGAAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAGACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAACCCAGAGTTCAAGCGGAAGTTGGACCGGATGGTGGAGATAAATGAGAAGCTTGTTGCTGTTGGTGAGAGCGATGACATAGCGGTGGTGAAGAACTTAAAGAGGATCCCACTGGTTGCTGCCTTGGTGTCTGAACTCTTGGCTACATATCTAATGCCTCCAATTGAGTCAGGGTCTGTAGATTTGGCAGAGTTTGAACCACAACTTGTGTACTAA 1275 0.4518 MLLLSPPQPQLQPFFTSLHMAALVKPISNVTPKFVSSPRMGSSHSSKFSTIIRMSATATPPPSTSTKPASSKKGNIKETLLTPRFYTTDFDEMETLFNTEINKNLNQDEFEALLQEFKTDYNQTHFVRNKEFKEAADKLEGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRTAFYEGIGLNTKEFDMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMVEINEKLVAVGESDDIAVVKNLKRIPLVAALVSELLATYLMPPIESGSVDLAEFEPQLVY 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01125 424 Pfam Rubrerythrin 149 282 IPR003251 GO:0016491|GO:0046872
Gma03g01125 424 PANTHER S-ACYLTRANSFERASE 18 424 - -
Gma03g01125 424 Hamap Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase [acsF]. 65 424 IPR008434 GO:0015979|GO:0015995|GO:0046872|GO:0048529
Gma03g01125 424 MobiDBLite consensus disorder prediction 55 74 - -
Gma03g01125 424 PANTHER MAGNESIUM-PROTOPORPHYRIN IX MONOMETHYL ESTER [OXIDATIVE] CYCLASE, CHLOROPLASTIC 18 424 IPR008434 GO:0015979|GO:0015995|GO:0046872|GO:0048529
Gma03g01125 424 TIGRFAM AcsF: magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase 71 409 IPR008434 GO:0015979|GO:0015995|GO:0046872|GO:0048529
Gma03g01125 424 CDD ACSF 79 408 IPR008434 GO:0015979|GO:0015995|GO:0046872|GO:0048529
Gma03g01125 424 SUPERFAMILY Ferritin-like 147 304 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01125 Gma-Chr3 36444902 36448234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01125 K04035 - gmx:100805393 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01125 03 36444902 36448234 Gma03g01125 03 36444902 36448234 ECH