Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01106 ATGATGATGCAGAGCAAAAGGGCAGGGTGGTGGTTGCTCAGAAAGGCAAAGGCAAAGCTGAGTCTTAACACTGACCGAAACCTCTCTTCTTCTCAACACCTCATTCTCGACAACCCCAATCTCAATCAGGTTTTGGTCGAAGGAAATGGTTTCTCCAGAATGGCCATTCTCAATAGACCCTCTGCTCTCAATGCTCTCAACACCAATATGGCGGCTACACTGCATAAACTTTATAGGAGCTGGGAAGAGGACCCTGATATTGGTTTTGTGATGCTCAAGGGCAGCGGCCGAGCATTTGCAGCTGGTGGAGATATTGTTGCGCTTTACCATTTGATAAACAAAGGGAACTTGGAAGCCTGTAAAGAATTTTTTAGAACGGCATATAGTTTTATGTACCTGATAGGTACATATTTGAAGCCACATGTTGCTCTTCTGAATGGCATTACCATGGGTGGTGGGGCTGGAATTTCAATCCCTGGGACATTTCGAGTTGCAACAGACAAAACTATTTTTGCTACCCCTGAAGTTCTTATTGGATTCCACCCTGATGCTGCAGCATCTTTTTACCTTTCACATTTACCTGGTCAATTAGGAGAATACTTGGCTCTGACTGGGGAAAAGCTCAACGGAGTAGAGATGGTTGCTTGTGGGCTTGCTACACACTATTCATCAAGTGCAAGGCTTCCTTTAATCGAAGAACAACTGGGGAAATTGGTTACTGATGACCCGTCTGTCATTGAAACTACTTTAGAACAGTATGGTGAGATCGTACATCTAGACAGCAGTAGCGTACTACAAAGGATTGAAGTTCTAGATAAATGCTTTTGCCATGACACAGTTGAAGAGATTGTTGATGCGATGGAAAATGCGGCAAGTGAAACAAATGATGCATGGTGCATTTCTACCCTAAATAAACTCAAAGAAGCTTCTCCATTGAGCTTGAAGGTTGCTTTGAGATCTATACGGGAAGGTAGATTTCAGACACTTGATCAATGCTTGTTGCGTGAGTACCGTATGACTTTACAAGCAATTCATAGGCAGATATCTGGGGACTTTTGTGAGGGAGTGAGGGCACGCGTGGTGGACAAGGACTTTGCACCAAAGTGGGATCCTCCAACCTTGGAAAAGGTGTCTCAAGATATGGTGGATCACTACTTCTTACCTCTGAGTGAATCTGAACCTGATCTAGAGCTGCCCACAAACAATCGTGAAGCATTTTTGTAG 1224 0.4395 MMMQSKRAGWWLLRKAKAKLSLNTDRNLSSSQHLILDNPNLNQVLVEGNGFSRMAILNRPSALNALNTNMAATLHKLYRSWEEDPDIGFVMLKGSGRAFAAGGDIVALYHLINKGNLEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGISIPGTFRVATDKTIFATPEVLIGFHPDAAASFYLSHLPGQLGEYLALTGEKLNGVEMVACGLATHYSSSARLPLIEEQLGKLVTDDPSVIETTLEQYGEIVHLDSSSVLQRIEVLDKCFCHDTVEEIVDAMENAASETNDAWCISTLNKLKEASPLSLKVALRSIREGRFQTLDQCLLREYRMTLQAIHRQISGDFCEGVRARVVDKDFAPKWDPPTLEKVSQDMVDHYFLPLSESEPDLELPTNNREAFL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01106 407 Pfam Enoyl-CoA hydratase/isomerase 53 386 IPR045004 -
Gma03g01106 407 Gene3D - 39 403 - -
Gma03g01106 407 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 14 406 IPR032259 GO:0003860
Gma03g01106 407 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 14 406 - -
Gma03g01106 407 CDD crotonase-like 44 228 - -
Gma03g01106 407 SUPERFAMILY ClpP/crotonase 44 372 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01106 Gma-Chr3 36012257 36024092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01106 43 406 Miscellaneous Gene Families AT3G60510 64.781 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01106 K05605 - gmx:100801676 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01106 03 36012257 36024092 Gma03g01106 03 36012257 36024092 ECH