Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00981 ATGGCATCATCAGATGAAGAAGGTGAAATTATCCCAGATCTTGTTGATAGTTATTGGTTTGAAAATGAAAAGGAAGAGTTTGTGTCACTTTCTAGTTTGACATTACTGTGGAGCATTAGTGAGACCGTATGTGGCTTGAAAGCACAAGTATTTTTGCGTGGCACCACTGATGACGACGGTCTCCAGACAATTCACAAACAAATAATCGGATGGAGATTTGAACTTCCCTCTGGGAAGCCTGAGATTTCAGTGCTTTCAAAGGACAAAAGCTGGATAACTCTCCAAAGACCAAGAAAGTGTTTTGAGAGTACAATTAAGGCAATCTTGGTCACAGTATATTGTTTACATTTTGTGAAATGGAATCCAGAGGAATCTCAAATATGTATTTGGGTCAAAATGCTGAAGGCCTTTAGGTGTGCATTTTCTTTTGTCCTTTTCAGATTTCTGATCTGCCATACTCCATTCAATTCATTAATGAAATGCCTGTCTTGCAGCTCATTTGATATTGTGCCATCCGAGAATGATCTTCTTAGTAATGTGACATTGATTAGAGAAGCTGTTGAAAGGGATAAAGATTTAACAAAATCCAAGTATCTGCTTGATTTCATGGAAAGGGCATGTTCAAATGAAGGCTTCCATGAGTCCAGTAatgttcttcctacaaagaaatcaaagtttattgtggactccgaggatgaggagaatgaccaatctgatgttctaactacaaagaaatcaaagtttattgtggactttgaggatggggagaatgaccaatctgatgttcttcctacaaagaaatctaagtttattgtggactccaaggatgaggagaacgaccaatctgatgttcatcctacgaagaaatctaagtttattgtggactccgaggatgaggagaatgaccaatctgatgttcttcctacaaagaaatcaaagtttattggggactttgaggatgagaagaatggccaatctgatgtttttcctacaaaggaatcaaagtttattgtggactcagaggatgaggagaatgaccaatctgatgGTGAACTCGATCCCGATGGAGAGCAAAATATTGGATATGATACTGTTTGTGCAATATGTGATAATGGTGGTGAAATACTTCCTTGTGAAGGAAGATGTCTGAGATCCTTTCATGCAACCAAAGAGGCTGGTATAGATGCAGTTTGTGAATCTCTTGGCTACACTAGTGCTCAAGTTAAGGCCTTTCCAAACTTTTACTGTCAAAATTGTAAATATAAGCTGCACCAGTGCTTTGCATGTGGCAAACTGGGTTCATCTGATGTATCATCTAAAGCAGAGGTATTTCCTTGTGTTACTGCAAATTGTGGTCACTACTACCATCCTGAATGTGTTGCAAGACTTCTCTCCCCTAGCATTGACACTGAACAAGAGGAAATGAGAAAGAAAGTTGCCATGGGAAAAGCATTTGTCTGTCCTCTTCATATATGTTCTTTATGTAAAAAAGGTGAAAATAAAAATTTTCATGATTTGCAATTCGCAATATGTAGACGCTGCCCTAAAGCTTACCACAGAAAATGCTTACCCAGGGAAATTTCCTTCGTATTTGATAATGATAAGAGCATTGAGCAGAGGGCTTGGGATGGTCTACTTGACCATCAAATTTTGATATATTGCCTGGATCATGTGATAGTTAGGGAACTCGGGACTCCTGCTAGAGACCATCTGGTATTTCCTGATGTGAAAGTCAGAAAGAAGGTATTGAATTACAAATTATTAGGCAATGGAAAAAATACTCTAAATTTGGGGCAAAGTTTTGAAGATCTTCATCCTAAGAAAACATTGGTACCAAACCTTGTCACAAAGCGAAGTGTTAGCATCCAAGATGGTGATTCTGCCAAAGATATGGAGAAAATATGTTTAAAGAAAGATAAATGTTTCTCAAGTGGATCAGTCAAGTTTGATAGGGATAGAAAATATTTGAAGGTTAAAAATCTGTCTGTGTTAAATAGTTCCTTACAAAGGCCTGCAAAAAAGTTGCCTTTGAAAATTGCTAACTTGTCCTGTAATTCAAGATTACGTGAAGATAAATCTTTGCAGAAAAAAATGGTTGATGGAAGTATTGGAAAAACAGGCATAGAGAAGCCTCTAAAAAAAATCCAAACTTCACTTGACGCTAACAACGCTGAAATGGAAAATAGTATTTTGTCTTTAATGAAAGATACCATGTCTACATTTAATGAGGAAGAATTCAAAAAGAACCATCAAGCCTTCTCTACAACTTCTGGTTTCACCGAACCTGTATCTCATCATAAGAACCTTACTCAAGGAAAAGTAGAAGGTTCAGTTAAGGCTATTCAAACAGCTTTGCAGAGGTTAGAAGAAGGTGGTAGTATTGAAGAAGCAAAAGCTATTTGTGATCCAGGGGTCCTCCATCAGCTTTTTATTTGGCAGAAACAGCTCAAGGTCTATCTTTCACCTTTTCTTCATGGTATGCGGTATACTTCCTTTGGTCGCCATTTCACTAAAATAGACAAGCTGAAGGAGGTTGCTAATAGGCTTCATTGGTATGTTCAGAATGGAGACACGGTTTTGGACTTCTGTTGTGGTTCTAATGACTTCAGTCGTCTAATGAAATCAAAGCTTGAAGAGATGGGGAAGTCATGTTCATTTAAGAACTATGATTTATTCCAACCCAAGAATGATTTCAACTTTGAAAAGAGAGATTGGATGAGTGTCAATGCAGAAGAATTACCCAACGGTTCTCAACTTATCATAGGGCTGAATCCTCCTTTTGGGGTTAAGGGTTCTCTTGCTAACAAATTTATTAACAAGGCGTTGACATTTAAGCCAAAACTCCTTATACTTATTGTGCCAAAAGTAACTAAACGACTTGACAGAAAGAAAGAAGGATATGATTTAATTTGGGAGGATGATGAGATGCTTTCAGGAAAGTCATTTTATCTACCTGGTTCCGTTGATACACGCGACAAGCAATTGGAAGACTGGAACTTGAAGCCACCACCTCTCTACCTTTGGAGTCGCCCTGATTGGACCACTAAGCACAGGGAAATTGCTCAAAAGCATTGTCATATCAAGGAAGAATATGATGTGCATGTGAATGGAAAAGAAGTGAAGAATTATCTTATGGAGGAGAATCATGAGTGTTATCAGAATTGCCGTGGCTTACATGTCCCTGGGAATGTTTTGAGCATATTTGATGGTATTCCAAATGATAATGGTGCCAATGCACCTGAGGAAGGTGCAACTAGCAAT 3261 0.3349 MASSDEEGEIIPDLVDSYWFENEKEEFVSLSSLTLLWSISETVCGLKAQVFLRGTTDDDGLQTIHKQIIGWRFELPSGKPEISVLSKDKSWITLQRPRKCFESTIKAILVTVYCLHFVKWNPEESQICIWVKMLKAFRCAFSFVLFRFLICHTPFNSLMKCLSCSSFDIVPSENDLLSNVTLIREAVERDKDLTKSKYLLDFMERACSNEGFHESSNVLPTKKSKFIVDSEDEENDQSDVLTTKKSKFIVDFEDGENDQSDVLPTKKSKFIVDSKDEENDQSDVHPTKKSKFIVDSEDEENDQSDVLPTKKSKFIGDFEDEKNGQSDVFPTKESKFIVDSEDEENDQSDGELDPDGEQNIGYDTVCAICDNGGEILPCEGRCLRSFHATKEAGIDAVCESLGYTSAQVKAFPNFYCQNCKYKLHQCFACGKLGSSDVSSKAEVFPCVTANCGHYYHPECVARLLSPSIDTEQEEMRKKVAMGKAFVCPLHICSLCKKGENKNFHDLQFAICRRCPKAYHRKCLPREISFVFDNDKSIEQRAWDGLLDHQILIYCLDHVIVRELGTPARDHLVFPDVKVRKKVLNYKLLGNGKNTLNLGQSFEDLHPKKTLVPNLVTKRSVSIQDGDSAKDMEKICLKKDKCFSSGSVKFDRDRKYLKVKNLSVLNSSLQRPAKKLPLKIANLSCNSRLREDKSLQKKMVDGSIGKTGIEKPLKKIQTSLDANNAEMENSILSLMKDTMSTFNEEEFKKNHQAFSTTSGFTEPVSHHKNLTQGKVEGSVKAIQTALQRLEEGGSIEEAKAICDPGVLHQLFIWQKQLKVYLSPFLHGMRYTSFGRHFTKIDKLKEVANRLHWYVQNGDTVLDFCCGSNDFSRLMKSKLEEMGKSCSFKNYDLFQPKNDFNFEKRDWMSVNAEELPNGSQLIIGLNPPFGVKGSLANKFINKALTFKPKLLILIVPKVTKRLDRKKEGYDLIWEDDEMLSGKSFYLPGSVDTRDKQLEDWNLKPPPLYLWSRPDWTTKHREIAQKHCHIKEEYDVHVNGKEVKNYLMEENHECYQNCRGLHVPGNVLSIFDGIPNDNGANAPEEGATSN 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00981 1087 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 158 1068 - -
Gma03g00981 1087 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 827 935 IPR029063 -
Gma03g00981 1087 CDD PHD2_NSD 425 490 - -
Gma03g00981 1087 MobiDBLite consensus disorder prediction 273 358 - -
Gma03g00981 1087 PANTHER EDM2-LIKE PROTEIN1 1 139 - -
Gma03g00981 1087 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 362 422 IPR013083 -
Gma03g00981 1087 CDD PHD3_NSD 492 524 - -
Gma03g00981 1087 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 423 523 IPR013083 -
Gma03g00981 1087 MobiDBLite consensus disorder prediction 273 341 - -
Gma03g00981 1087 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 139 - -
Gma03g00981 1087 PANTHER EDM2-LIKE PROTEIN1 158 1068 - -
Gma03g00981 1087 SMART PHD_3 492 558 IPR001965 -
Gma03g00981 1087 SMART PHD_3 365 420 IPR001965 -
Gma03g00981 1087 SMART PHD_3 425 491 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00981 Gma-Chr3 33402958 33419674 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00981 - - gmx:100810533 2132.07