Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00973 ATGGAGAAAACGGTTCACATAGCAGTAGTTCCTGGTCCTGGCTTCAGCCACTTAGTCCCAATTCTTCAATTCTCAAAGAGACTTGTTCATCTCCATCAAAACTTTCATGTCACATGCATAATTCCCTCAGTAGGGTCTCCCTCATGTGCCTCAAAATCCATCCTTGAAACTCTTCCACCAAATATAACCTCTATTTTTCTTCAACCAGTGAAACCTGAAAACCTACCACAAGAGGTTGCTATAGAAGCCCAAATTCAGTTCACAGTGACCTTCTCTCTGCCATCTATACATCAAACCCTCAAGACCTTAACTTCAAGGACTCACTTTGTGGCCTTGGTGGCTGATTCTTTTGCCTTTGAGGCATTAGATTTTGCTAAAGAACTCAACATGTTGTCATATATTTACTTCCCTACATCAGCAACAACACTCTCTTGGTACTTGTATGTGCCCAAATTGGACAAGGAAACATCATGTGAGTATAGAGATTTTCCTGAGCCAATTCAAATACCAGGTTGTGTACCAATTCACGGCAGGGATCTCAATAACCAAGCTCAAGATCGATCGAGTCAAGCTTACAAACTCTTCGTCCAACGCGCTCAGCGACTCCCTTTGGTTGATGGGATTTTCATGAATACCTTCTTGGAAATGGAAACAAGTCCTATAAGAACATTGAAAGAGGAGGGAAGAGGGTCCCCTCTTGTGTATGATGTTGGACCAATTGTCCAAGGTGGTGATGATGATGCTAAAGGGTTGGACTTGGAGTGTTTAACGTGGTTGGACAAACAACAAGTCGGTTCTGTTTTGTTTGTTTCTTTTGGGAGTGGTGGAACACTCTCACAAGAGCAAATAACTGAGCTTGCTTGTGGTTTGGACTTGAGTAATCATAAGTTCTTATGGGTTGTGAGAGCACCAAGTAGTTTAGCCAGTGATGCATATCTCAGTGCACAAAATGATTTTGATCCTTCGAAATTCCTGCCATGTGGGTTTTTGGAGAGAACCAAAGAGAAAGGTATGGTTGTTCCTTCATGGGCACCCCAAATTCAAGTCCTTAGCCACAGTTCAGttggtggattcttgactcactgtggttggaattcaatcctcgagagtgtGCTAAAGGGTGTTCCATTCATCACATGGCCACTGTTTGCTGAGCAGAGAATGAATACGGTTTTGCTATGTGAGGGTCTCAAAGTTGGAGTGAGGCCAAGAGTTGGTGAAAATGGTTTGGTGGAAAGGGTTGAAATTGTGAAGGTGATAAAGTGTCTAATGGAAGAGGAAGAAGGTGAGAAAATGCGTGAAAGAATGAATGAGTTAAAAGAAGCTGCTATTAATGCTATCAAAGAAGATGGGTCTTCTACAAGGACCCTTTCTCAGTTAGCACTGAAGTGGAAGAGTTTGGCATAA 1407 0.4087 MEKTVHIAVVPGPGFSHLVPILQFSKRLVHLHQNFHVTCIIPSVGSPSCASKSILETLPPNITSIFLQPVKPENLPQEVAIEAQIQFTVTFSLPSIHQTLKTLTSRTHFVALVADSFAFEALDFAKELNMLSYIYFPTSATTLSWYLYVPKLDKETSCEYRDFPEPIQIPGCVPIHGRDLNNQAQDRSSQAYKLFVQRAQRLPLVDGIFMNTFLEMETSPIRTLKEEGRGSPLVYDVGPIVQGGDDDAKGLDLECLTWLDKQQVGSVLFVSFGSGGTLSQEQITELACGLDLSNHKFLWVVRAPSSLASDAYLSAQNDFDPSKFLPCGFLERTKEKGMVVPSWAPQIQVLSHSSVGGFLTHCGWNSILESVLKGVPFITWPLFAEQRMNTVLLCEGLKVGVRPRVGENGLVERVEIVKVIKCLMEEEEGEKMRERMNELKEAAINAIKEDGSSTRTLSQLALKWKSLA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00973 468 Coils Coil 422 449 - -
Gma03g00973 468 Gene3D Glycogen Phosphorylase B; 6 453 - -
Gma03g00973 468 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 391 IPR002213 GO:0008194
Gma03g00973 468 CDD GT1_Gtf-like 6 423 IPR002213 GO:0008194
Gma03g00973 468 PANTHER GLYCOSYLTRANSFERASE 1 467 - -
Gma03g00973 468 Gene3D Glycogen Phosphorylase B; 247 448 - -
Gma03g00973 468 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 467 - -
Gma03g00973 468 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00973 Gma-Chr3 33216213 33217740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00973 3 466 Glycosyltransferase AT1G01420 46.781 9.76e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00973 K08237 - gmx:100778639 925.62