Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00965 ATGGCATCAACGTTTCTCACCCTACCAACTCCCTTCCTACACAAAACCAATGCCATCAGTTTCTCTAACAAGAGACCCTCATTTTTGCAGAGGAGCTCTCTGAAGATTCATGCAATTACCAAAAAATGGGAACCCACAAAGGTTGTGCCTCAGGCTGATAGAGTTCTTATTCGTTTGGAGGAGCTTTCAGATAAAACAGTTGGTGGAGTTTTGCTGCCTAAATCAGCTGTTAAATTTGAGCGCTATCTTGTGGGAGAAATCCTAACTGTTGGTGCTGAGGCTGGAGAACTAAAGGCTGGAACAAAGGTACTATTCACTGACATGAATGCTTATGAGGTGGATTTGGGGACTGATGCAAAACACTGCTTCTGTAAAGCAAGTGACTTATTGGCCGTTGTGGAGTAG 405 0.437 MASTFLTLPTPFLHKTNAISFSNKRPSFLQRSSLKIHAITKKWEPTKVVPQADRVLIRLEELSDKTVGGVLLPKSAVKFERYLVGEILTVGAEAGELKAGTKVLFTDMNAYEVDLGTDAKHCFCKASDLLAVVE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00965 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Gma03g00965 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Gma03g00965 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g00965 134 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 15 133 - -
Gma03g00965 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 15 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g00965 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g00965 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00965 Gma-Chr3 33091774 33095071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00965 15 134 Calmodulin-binding Proteins AT5G20720 27.273 2.57e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00965 K04078 - gmx:100306026 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00965 03 33091774 33095071 Gma03g00965 03 33091774 33095071 ECH
Gma03g00965 03 33091774 33095071 Gma07g01105 07 14217602 14221918 GST