Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00941 ATGGCTTCAAGACCCGGAATTCTCTCTGATTGGCCATGGAAGCCTCTTGGAAGCTTTAAGTATATGTTACTAGCTCCTTGCATCGTTCATAGCTCGTATTCTATGATGGTGAAAGATAACAGTGAGAAGGACATGTTTAACTTTCTCATATTACCCTTTTTGCTATGGCGTATGCTTCATAACCAAATATGGATCAGTTTCTCTCGTTACCGAACTGCCAAAGGCAACGCAAGAATTGTTGACAAGGGAATTGAATTTGATCAAGTTGACAGAGAAAGAAATTGGGATGACCAAATATTGTTTAGTGGCTTAATATTCTACTTGGCAAACTATGTATTTGCTGGGGCATCACACATTCCATTGTGGAAAACAGATGGAGCAGTTATGGCAATACTGCTTCATATGGGACCAGTGGAGTTTCTTTATTATTGGTTACACAGAGCACTGCATCATCACTTTCTCTATTCACGATACCATTCTCACCACCATTCTTCCATTGTCACAGAACCCATTACTTCTGTCATCCATCCATTTGCAGAGCACATATCATATTTCTTTCTCTTCGCAATACCCTTGTTAACCCTTGCGTTTACAAAAAAGGCCTCTATGATGGTTGTGTTTGGATATGTGACTTACATTGATTTTATGAATAATATGGGTCACTGCAACTTTGAGATCATTCCAACGTGGCTATTTAACATGTTTCCTCTTCTCAAGTATCTCATGTACACTCCATCGTTTCACTCTTTGCACCATACCCAGTTCAGGACAAATTACTCCCTATTTATGCCTTTTTATGACTACATCTATGGCACCACAGACAAGGCTACAAATCAACTATATGATTCTGCATTAAAACGAGAAGAAGAAACCACAGATGTTGTGCACTTGACCCACCTCACTACACCTGAATCCATCTATCATCTCAGGCTTGGATTTCCTTACCTTGCCTCCAAACCTTACACACCAAAATGGTACCTTTTTTTGATGTGGCCTATGACGGCTTGGTCTGTGTTCCTCACCTGGGCCTATGGTCGTACATTCATTGTAGAAGGGTGTCGTTTTGACAAACTTAAGTTGCAAACTTGGGCAATACCTAAGTACAATTTTGAATACTTTCTACAATCGGAAAAAATGGCCATCAACAAAATGATAGAGGAAGCAATACTAGATGCTGACAGAAAAGGCATAAAAGTGTTGAGCCTAGGTCTCATGAATCAAGGAGAGGATCTTAACATCTATGGAGGATTATATGTTAGTCGGAATCCAAATCTAAAAGTTAAGATTGTAGATGGAAGTAGCCTTGCTGCTGCAGTTGTTCTTAACAATATTCCTAAAGGAACAACTCAAGTTTTACTCATGGGAAAGCTCACCAAGGTTGCTTATGCTCTTGCTTTCGCATTATGTCAACGAGGTGTTAAGGTTGCCACAATGCATAAACATGATTATGAGAGGCTCAAAAAGTCTCTCACTAATTCTGAATCTAATTTGATCATTGCAAAAGGCTACACTCAAATGACTTGGTTAGTGGAAGATCAATTGACTGAAGAGGAACAACTAAAGGCACCCACAGGATTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGCATAGCTGGGATAGTTCACTCTTTAGAAAGATGGAGTACAAATGA 1653 0.3981 MASRPGILSDWPWKPLGSFKYMLLAPCIVHSSYSMMVKDNSEKDMFNFLILPFLLWRMLHNQIWISFSRYRTAKGNARIVDKGIEFDQVDRERNWDDQILFSGLIFYLANYVFAGASHIPLWKTDGAVMAILLHMGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFFLFAIPLLTLAFTKKASMMVVFGYVTYIDFMNNMGHCNFEIIPTWLFNMFPLLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTTDKATNQLYDSALKREEETTDVVHLTHLTTPESIYHLRLGFPYLASKPYTPKWYLFLMWPMTAWSVFLTWAYGRTFIVEGCRFDKLKLQTWAIPKYNFEYFLQSEKMAINKMIEEAILDADRKGIKVLSLGLMNQGEDLNIYGGLYVSRNPNLKVKIVDGSSLAAAVVLNNIPKGTTQVLLMGKLTKVAYALAFALCQRGVKVATMHKHDYERLKKSLTNSESNLIIAKGYTQMTWLVEDQLTEEEQLKAPTGLVAKEGNECMAHSWDSSLFRKMEYK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00941 550 Pfam WAX2 C-terminal domain 451 526 IPR021940 -
Gma03g00941 550 PANTHER STEROL DESATURASE 1 528 - -
Gma03g00941 550 Pfam Fatty acid hydroxylase 133 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Gma03g00941 550 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00941 Gma-Chr3 32574365 32581221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00941 1 525 Lipid Metabolism Gene Families AT1G02190 58.161 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00941 K15404 - gmx:100805835 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00941 03 32574365 32581221 Gma03g00941 03 32574365 32581221 ECH