Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00901 ATGAAGGAACTAGAGAAAATGAAGGAGGTTGCTAAACTAAAGCAACTGCCTCCAGTGTACACAGGTAAATGGGCCAGTGCAACAAATGAGGAAGTAGAAGAGGAGCTAGAAAAAGGAACTCCTTACACATATCGGTTTCGAGTCCCTAAAGGAAGTTTAAAAATTAATGACCAAATACGAGGCGAAGTTAGTTGGAACTTGGATACACTTGGAGATTTTGTTATAATGAGGAGTAATGGTCAGCCTGTTTATAACTTTTGTGTAACGGTGGATGATGCAACCATGGCAATTTCCCATGTGATCAGGGCAGAGGAGCATTTACCAAACACTCTGAGGCAGGCATTGATATATAAGGCTCTAGGATTTCCAATGCCTTATTTTGCACATGTTTCTTTGATTTTAGCTCCTGATCGGAGTAAATTATCAAAACGACATGGGGCAACATCAGTGGGTCAGTTCCGGGAGATGGGATACCTACCGGAAGCAATGGTGAATTACCTAGCATTATTAGGTTGGGGCGATGGGACTGAAAATGAGTTTTTTACACTTGATCAACTTGTTGAAAAATTCACTATCGAACGTGTTAACAAAAGTGGTGCTATTTTTGACTCAACAAAGTTAAGGTGGATGAATGGTCAGCATTTAAGAGCACGTCCATCAGAGGAGTTGACCAAACTTATTGCAGAGTACTGGAAGACATCTGGCTTACTCACAGTATCAGATGGGCCCTTTATTGATGAAGCAGTTCACCTACTTAAGGATGGGATTGACTTGATAAATGATGCAGACAAGGCCCTTGCTAACTTGCTTTCTTATCCTGTGCATTCTACTTTACAGAGCGATGAAGCAGAATCTGTCTTGCTAGATAATCTTTCTGAATTTGCTGCTAGCCTCTTGGCTGCCTATGATAGTGGTGATCTGGTAGCAGCACTTGAAGAAGGCCATACCGGCTGGCAAAAGTGGGTGAAAGGCTTTGGAAAATCGCTAAAGCGCAAGGGAAAATCGCTTTTCATGCCGCTCCGACTTCTGTTGACCGGCAAACTCCATGGACCTGACATGGGGGCAAGTGTTGCATTGCTCTATAGAGCTGGGACTAGCAATGTAGTAGCTCCTGAATCTGGCTTTGTGACACTGGATGAAAGATTTAAAATGCTTAGGCAAATTGACTGGGAAGCATTGTCCAAGGACCAACCTGTCAAAGAGACTGCTGCTCCTGTCTAA 1221 0.4308 MKELEKMKEVAKLKQLPPVYTGKWASATNEEVEEELEKGTPYTYRFRVPKGSLKINDQIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPEAMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRARPSEELTKLIAEYWKTSGLLTVSDGPFIDEAVHLLKDGIDLINDADKALANLLSYPVHSTLQSDEAESVLLDNLSEFAASLLAAYDSGDLVAALEEGHTGWQKWVKGFGKSLKRKGKSLFMPLRLLLTGKLHGPDMGASVALLYRAGTSNVVAPESGFVTLDERFKMLRQIDWEALSKDQPVKETAAPV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00901 406 TIGRFAM gltX_bact: glutamate--tRNA ligase 3 361 IPR004527 GO:0000166|GO:0004818|GO:0005524|GO:0006424
Gma03g00901 406 Pfam tRNA synthetases class I (E and Q), catalytic domain 3 209 IPR020058 GO:0004812|GO:0005524|GO:0043039
Gma03g00901 406 Gene3D - 276 368 IPR020751 -
Gma03g00901 406 PANTHER GLUTAMATE--TRNA LIGASE, MITOCHONDRIAL-RELATED 2 387 - -
Gma03g00901 406 PANTHER GLUTAMATE--TRNA LIGASE 2 387 - -
Gma03g00901 406 Gene3D HUPs 1 218 IPR014729 -
Gma03g00901 406 SUPERFAMILY An anticodon-binding domain of class I aminoacyl-tRNA synthetases 203 362 IPR008925 GO:0000049
Gma03g00901 406 SUPERFAMILY Nucleotidylyl transferase 8 202 - -
Gma03g00901 406 Pfam Anticodon binding domain 223 360 IPR045462 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00901 Gma-Chr3 31858502 31868312 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00901 K01885 - gmx:100810730 808.905