Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00900 ATGAGTTCGCAGCAAATGCAAATGCAAATTCAAATCCAAAACAGTGGTGGTGGCAGTGGCAACAACAACAGCAGCAACATCCCAGTGAGCGAGGTTTTCTGGACTCTCGTCGACAAAGCCGACAAAAAATTCTCCAAAATCAGAGACCTTCCCTTTTACCAACGCAGCAGGCATGATACTTACTTTTATAAGGTGTTCAAGGTCTACACACAATTATGGAAGTTTCAGCAGGAGAATCGGCAGAAGCTGATTGAAGCTGGGCTTAAGAGATGGGAGATTGGTGAGATTGCATCTCGCATTGGGCAACTGTATTTTGGGCAGTACATGCGCACAAGTGATGCAAATTATCTCTCAGAGTCATATATATTCTATGAGGCCATATTGACTCGGGAGTATTTTAAGGAGGGGTTGTTTCAAGATGTGAATATTGCAAACAAACAATTGAGGTTCCTAGCTAGATTCATAATGGTGTGTTTGGTGTTGAACCGAAGGGAAATGGTGCAGCAATTGGTTAATCAGCTTAAAGTATTAGTTGATGAATGCAAGAGAACATTCCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGGTTCAGGAAATTCTCAGATTTTTAAAAGCTGAAACTGCTTTTATGAATATCAGGCCCTTGAGATACAGTCTAGTTTTGGACTCTCATCCTGATACTTTACCCCATGTGGCTGCAGCCATCACGAAGCGACATTTGAAACTACGAGATGCTGTATTAAGTAGCTTCCATCCAAATGAGGTAAAGTATTCAGAGCTCACCATTGACACTTTTAGGATGCTTCAATGTCTGGAGTGGGAACCTAGTGGTTTGTTTTACCAGTCAAGTGGTTCAAAACTTAGTCAAAATGGGGCTACTGGAACTAGTCGTATCAGTTATATCCAAGATATTGCTGATCCTACCTTACCAGCAAACCCACGAAAAGCTGTGTTATACCGTCCTTCGCTGACCCATTTTATAGCTGTTCTTGCCACAATATGTGAGGAGCTTCCTTCTGATGGTATTCTCCTTGTGTATTTGTCAGCTTCAGGATATTGTGGTTCTGCACAGAATGAATCTGGCTGCATACACTTTGGTCCACGTGGAGATAGAGGATCAAACTGCATATATCCATCTGACTTTGTACCGTTTACTAGAAGACCACTTCTTTTAGTCATTGATAACGACAACAGCAAAGCTTTTAAGGTCATAGCAGAAGCAGAAAAGGGAGAGTCAGTTGCTATGCTCCTTTCTCCAAGCTGTTCGCCTGCTTTGTCTGATTGCTCACATAATTCAAATGGGAGCCTATTCACCATGTTTCTTACAGCTCCACTGCAAGCTTTCTGTATGCTGTTAGGACTTTCAGGCACTGATATTGATTTGGACACATTCAACAAAGCTGAAATGCTGCTCTCATCTTCATTAAATAACTGGGGACTAGCATTGGCAACATCAGACACACTTAATCCTGTTTGGGGACAGATTTTAGGTGATCCCTTCATAAGGAGGCTTCTTTTGAGATTCATATTTTGCCAGGCAGTGTTGACCCTATATGCACCAGTTTACAATGACAACAAATTCCTTCCAACATGTGTCCCTTCTCTTCCGACACCTGTCCTGCCCCCAAGTTACTCATATCAGAGTGTAATTCTGAATCTAGCCAGCATGTTTGGTGCAACTAAGAGATTCATCTTCTCAGAGGATGTTCTTCCTGAAAGTATACAAACCAACATGAATCAATTAACTCTTTGA 1755 0.4171 MSSQQMQMQIQIQNSGGGSGNNNSSNIPVSEVFWTLVDKADKKFSKIRDLPFYQRSRHDTYFYKVFKVYTQLWKFQQENRQKLIEAGLKRWEIGEIASRIGQLYFGQYMRTSDANYLSESYIFYEAILTREYFKEGLFQDVNIANKQLRFLARFIMVCLVLNRREMVQQLVNQLKVLVDECKRTFQESDFKEWKLVVQEILRFLKAETAFMNIRPLRYSLVLDSHPDTLPHVAAAITKRHLKLRDAVLSSFHPNEVKYSELTIDTFRMLQCLEWEPSGLFYQSSGSKLSQNGATGTSRISYIQDIADPTLPANPRKAVLYRPSLTHFIAVLATICEELPSDGILLVYLSASGYCGSAQNESGCIHFGPRGDRGSNCIYPSDFVPFTRRPLLLVIDNDNSKAFKVIAEAEKGESVAMLLSPSCSPALSDCSHNSNGSLFTMFLTAPLQAFCMLLGLSGTDIDLDTFNKAEMLLSSSLNNWGLALATSDTLNPVWGQILGDPFIRRLLLRFIFCQAVLTLYAPVYNDNKFLPTCVPSLPTPVLPPSYSYQSVILNLASMFGATKRFIFSEDVLPESIQTNMNQLTL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00900 584 Pfam Protein SCAI 360 520 IPR022709 GO:0003714|GO:0006351
Gma03g00900 584 Pfam Protein SCAI 36 360 IPR022709 GO:0003714|GO:0006351
Gma03g00900 584 PANTHER PROTEIN SCAI 357 577 - -
Gma03g00900 584 PANTHER PROTEIN SCAI 13 356 - -
Gma03g00900 584 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 357 577 - -
Gma03g00900 584 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 13 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00900 Gma-Chr3 31840271 31852293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00900 - - gmx:100810202 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00900 03 31840271 31852293 Gma03g00900 03 31840271 31852293 ECH
Gma03g00900 03 31840271 31852293 Gma07g01140 07 15013555 15029691 GST