Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00895 ATGGCTTTACAATTTCTGAAACACCCCTTAACCATCTCACGAGGTTTGCAGAACGAGACAACCTTAACTTTTCTTTCTCGGCTACGAAATCCGAAGCTCCCATTGTCGGTGAGATGCGAAGACAATGTTCAGATTCCAACTTCTTTCCGGAGCTATGCTACTGCAAAATCAGAAAAGGTTTTGCAAGTGAAGAAGAAAAAGCGGCTGGATGAAATATGTGTTGAAAAATATCAGCAATATAGTAGATCCATCATCCAGTCATGGATTTTGCAAGGAAAAGTATATGTGGATGGGAAGGTGATAAATAAAGCTGGTACCCCTGTGCCTGACAAAGCTGTTGTGGAGATAATAGCTGATATTCCCAAATATGTATGTAGAGCTGGACACAAGTTAGAAGCTGCCATTGAACAGCTTGGTGTTGATGTTACTGGTAAAGTAGCTCTTGATTCTGGGCTGTCAACTGGAGGATTTACTGACTGCTTACTTCAGTATGGTGCATCACATGTTTACGGAGTTGACGTAGGTTATGGACAGGTAGCTGACAAAATTCGAAGAGATGAGCGTGTATCAGTGATAGAACGGACAAATTTAAGATATCTTGCTGAACTCCCACAAAATGTTGATTTGGTGACTTTAGACCTCTCATTCATCTCTATTCTCTTGGTCATGCCTGCCGTGGTCAATGTCATGAAGGAAAATGCAGCTTTAGTGACTTTGGTTAAACCACAATTTGAAGCTCGTAGATCTCAAGTAGGAAAAGGCGGAATAGTGAAAGATCCTGCTGTTCATCAAGAGGTCCTTGAGAAGATTGTAAAGGGAGTAGAGAAGTTTGGTTTCTGTTGTAAAGGATGGATTGAGTCTCCTCTGAAAGGTGCTGAGGGTAATATAGAATTCCTTGTTCACTTCAACAGAACCCATAATACAAGGGTTCCTGAAGATCTGGAGTAG 948 0.4135 MALQFLKHPLTISRGLQNETTLTFLSRLRNPKLPLSVRCEDNVQIPTSFRSYATAKSEKVLQVKKKKRLDEICVEKYQQYSRSIIQSWILQGKVYVDGKVINKAGTPVPDKAVVEIIADIPKYVCRAGHKLEAAIEQLGVDVTGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVADKIRRDERVSVIERTNLRYLAELPQNVDLVTLDLSFISILLVMPAVVNVMKENAALVTLVKPQFEARRSQVGKGGIVKDPAVHQEVLEKIVKGVEKFGFCCKGWIESPLKGAEGNIEFLVHFNRTHNTRVPEDLE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00895 315 CDD AdoMet_MTases 148 227 - -
Gma03g00895 315 Pfam FtsJ-like methyltransferase 123 303 IPR002877 GO:0008168|GO:0032259
Gma03g00895 315 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 63 307 - -
Gma03g00895 315 Gene3D - 56 118 IPR036986 GO:0003723
Gma03g00895 315 ProSiteProfiles S4 RNA-binding domain profile. 67 127 - -
Gma03g00895 315 CDD S4 67 116 - -
Gma03g00895 315 SMART s4_6 67 132 IPR002942 GO:0003723
Gma03g00895 315 TIGRFAM tly: TlyA family rRNA methyltransferase/putative hemolysin 68 297 IPR004538 GO:0003723
Gma03g00895 315 Gene3D Vaccinia Virus protein VP39 119 314 IPR029063 -
Gma03g00895 315 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 63 307 IPR004538 GO:0003723
Gma03g00895 315 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 307 IPR029063 -
Gma03g00895 315 Pfam S4 domain 68 112 IPR002942 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00895 Gma-Chr3 31765630 31772425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00895 K06442 - gmx:100781303 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00895 03 31765630 31772425 Gma07g01143 07 15095495 15101848 GST