Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00894 ATGGACTTAAAAGATGATGCTGTTAAGGGCATAGTCCCTTGGGATGGGACTCTCTCTTCATTTGATTTTTCCCTTTCTGCTCATACATTTTCTGACAAGTGGAAAAGGTTCAATCCTTCCTTTCCTGCATGGAAGTGGATCACATGTCCAAAACAACATCATTTGGTTGCTTCTCATAAGGTGGAAGGATACTTATCCCTGGAGAACATGTGCCATATCAAATCAAGTCAGTCATTACAGGAACAAGAGAGTGATAGAAGTCTCACATGGAAAGAAGAGTCCAACATCTCACAGAGAGAAGAGCCCTTTGATAAAGCAACTTTAGTATGTCCAGAGCATGAAGTAAACCACTATGATTTTCATATTGTCTACAGTGCTTCATATAGAGTTCCAGTCTTGTACTTCCGTTCGTACCGTAGTGATGGGCAACTTTTGCCGTTTAATGAAATTGAAAAGGACCTTCCTGGTCACTCTGCAAAGTTACGGTCAGAATCCAAATGGACATTTATAACTCACGAGGAACATCCATATTTGAACAGGCCATGGTACAAATTACATCCATGTGGGACAAGTGACTGGATGAAGCTTCTCTTTCATAGTGACTCATCTTTGAACAAAAATGGTTTTGTTATTGAACAGTATTTGATTTCCTGGTTCTCGGTCATTGGACAAGTTGTTGGTCTTAAAATTCCTTTGGAAATGCTGGATACTGTAGTTTCTAATGATTCTTAG 732 0.3948 MDLKDDAVKGIVPWDGTLSSFDFSLSAHTFSDKWKRFNPSFPAWKWITCPKQHHLVASHKVEGYLSLENMCHIKSSQSLQEQESDRSLTWKEESNISQREEPFDKATLVCPEHEVNHYDFHIVYSASYRVPVLYFRSYRSDGQLLPFNEIEKDLPGHSAKLRSESKWTFITHEEHPYLNRPWYKLHPCGTSDWMKLLFHSDSSLNKNGFVIEQYLISWFSVIGQVVGLKIPLEMLDTVVSNDS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00894 243 Pfam Autophagocytosis associated protein, active-site domain 30 231 IPR007135 GO:0019787
Gma03g00894 243 Gene3D - 64 229 - -
Gma03g00894 243 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 11 234 - -
Gma03g00894 243 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 11 234 IPR007135 GO:0019787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00894 Gma-Chr3 31760157 31764841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00894 K17888 - gmx:100808589 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00894 03 31760157 31764841 Gma07g01144 07 15102837 15106008 GST