Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00888 ATGGCAACAACATTAATCCCCTCAGATCTCACTGAATTTGTGATGCTTCAAGGGAATGGAGTAAAGGGCCTCTCTGAAATGGGCCTAAAGAGCCTCCCAAGTCAATACATCCAACCTTTGGAAGAGATAATGATCAATGTTTTGCCACAAGAGTCCATTCCCATCATTGACATGTCCAATTGGGATGACCCGAAAGTGCAAGATTCAATTTGTGATGCAGCTGAGAAGTGGGGCTTCTTCCAAATCATCAATCATGGGGTGCCCCCTCAAGTGTTGGACAATGTCAAGGATGCAACTTATAGGTTTTATGGGTTGCCACCTGAGGAGAAGGTTAAGTACACAAAAGAGAATTCTTCAACAAAGCATGTGAGGTATGGGTCTAGCTTTAGCCCTGAAGCAGAGAAAGCCCTAGAGTGGAAGGATTATCTCAGCCTCTTCTATGTTTCTGAGGATGAGGCTGCAACAACATGGCCCCCTGCATGCAGGGATGAAGCACTGGAATACATGAAGAGGTCTGAAATCTTTATCAAACGACTTTTAAATGTGCTAATGAAGAGGCTAAATGTAAGTGAAATTGATGAGACAAATGAATCAATATTTATGGGTTCAAAAAGGATCAATCTCAATTATTATCCTGTTTGCCCTAATCATGACCTAACGGTAGCAATAGGGCGACACTCTGATGTCTCAACTCTAACCGTTCTCCTCCAAGATGAAACCGGTGGCCTCTACGTCCGAGCACCGAACCACCACGACTGGATTCATGTGCCACCCGTCTTCGGTGCTATAGTGATCAATATAGGTGATGCACTCCAAATACTGAGCAATGGGCGATACAAGAGTATTGAGCATCGTGTGTCTGCCAACGGAAGCAAGAGTAGGGTTTCAATGCCTATTTTTGTAAACCCTAGACCCTCAGATGTTATTGGCCCTTTGCCTCAAGTGCTTGCTAGTGGTGAGAAGGCCATGTATAAAAATGTGTTGTATTCGGATTATGTGAAGCATTTCTTCAGGAAAGCTCATGATGGAAAGTTGACAATTGACTATGCCAAGATATGCTGA 1062 0.4369 MATTLIPSDLTEFVMLQGNGVKGLSEMGLKSLPSQYIQPLEEIMINVLPQESIPIIDMSNWDDPKVQDSICDAAEKWGFFQIINHGVPPQVLDNVKDATYRFYGLPPEEKVKYTKENSSTKHVRYGSSFSPEAEKALEWKDYLSLFYVSEDEAATTWPPACRDEALEYMKRSEIFIKRLLNVLMKRLNVSEIDETNESIFMGSKRINLNYYPVCPNHDLTVAIGRHSDVSTLTVLLQDETGGLYVRAPNHHDWIHVPPVFGAIVINIGDALQILSNGRYKSIEHRVSANGSKSRVSMPIFVNPRPSDVIGPLPQVLASGEKAMYKNVLYSDYVKHFFRKAHDGKLTIDYAKIC 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00888 353 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 195 303 IPR005123 -
Gma03g00888 353 Gene3D - 10 335 IPR027443 -
Gma03g00888 353 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 151 IPR026992 -
Gma03g00888 353 PANTHER FERULOYL COA ORTHO-HYDROXYLASE 1-LIKE 8 344 - -
Gma03g00888 353 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 8 344 - -
Gma03g00888 353 Pfam 2OG-Fe(II) oxygenase superfamily 208 303 IPR044861 -
Gma03g00888 353 SUPERFAMILY Clavaminate synthase-like 20 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00888 Gma-Chr3 31675702 31678405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00888 20 343 Glycosyltransferase AT5G59530 34.024 1.07e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00888 K06892 - gmx:100777556 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00888 03 31675702 31678405 Gma07g01149 07 15140246 15142932 GST