Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00887 ATGGAAGACTCGGATTCAGTTGCTACACTGATAGATTCTACTACTTCTAAGATACAACAGCTGCAGAAGGCATTTGCTGAACTTGAAAGTTATCGGGCTGTTACTCTTAACTTGAAATGGAAAGAACTAGAGGAACATTTCCATGGTCTTGAGAAATCCTTGAAGAGGCGCTTTGATGAATTGGAAGACCAAGAGAAAGAGTTTGAAAACAAAACGAGGAAGGCTCGTGAGATACTGGAGAAGCGGGAAGCAGCTGTTTTTGCTAAGGAGCAAGATTCGTTGCAGAGGCTTCAAGAGAAAAGAGATGCTGCTTCATTTGCCATTGTAAATGCTCGAGAAAAGCAGAGGAAGATTTCATCACGTGAATTGGCTACTTTCTCTAATGGTGGTAAAGGAGGGATGCCAGGAGTGGAGGAGAAACCAGTGGATACTTTGTCCACTGCAGCTGAAGGTAATGTGGAAGATGTAAAACTTCCTGATAATGGAAATGTGGAGTTGGTATCTTATCCAGAGTTGGTAAAACTATGCAAAGAGATGGATGCTGCTGGACTTCACAAATTCATATCTGATAACCGTAAGAACCTTGCTGCTGTAAGGGATGAAATACCAAATGCTTTAAGAGCTGCTCCTAATGCTGCCTGTTTAGTTTTAGATTCTCTGGAAGGATTTTACTGTACAGAAGTGTCAAATCAGGACGTAAAGAAGGATGCTAACTTATTGGGTCTTCGCCGAACCTGTATCATGCTGATGGAATGTCTCTGTGATTTCCTGAGCAGCTCAGGTTTTGTTTCTAATGTGATTTCAGAAGATATCAAGGACAGGGCAAAAGCAGTTGCTGAAGAATGGAAACCCAGGCTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTACAACTTCTTGCTAGTTTTGGAATTGCCTCTGGTTTTGATGAGGAGGAGTTATCTAGATTGATTCCAATGGTGTCTCGGCGCCGCCAAACTGCTGATTTATGTCGTTTTCTTGGGCTGTCAGAAAAGATGCCTGGTGTAATTGAGGTTTTGGTGAACAGTGGGCGACAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACTGAACAGTTTTGTCCTGTTTCTTTACTGAAGTCTTACTTGAAAGATGCTAGAAAAGCTTCTTCTCCTGTTAGAAGTGCTCACTCTTCTCCCACTGCACAGATTGAGGTGAATGAACGAGAGCTGGTTGCACTTAAGGCTGTAATCAAGTGCATTGAAGAACATAAACTTGATGAGCAGTATCCTCTGGATCCTCTCCAGAAACGATTGGTGCAGCTAGAGAAGGCCAAAGCAGACAAGAAGAGGGAAACTGAAGCAACAAAGCCTCAACCCAAGAGACCTCGTGCAAATGGTGTGGGATACGGTCCACGTGTCACTAACATTCTTTCGGATAAAACTTGCTATGCTAGAGTTGCTGACAGGTATCCACAATACGTGTATGACCGACCACCTTACATGTACCCTGCACCCACTGAGAATCATTGCCCCCCTCTCATGACCACTGCAACATATAACATCTCTCCCAGCCATGGCAACTACTTTGGAAATGGGTATCAGTACCAAGCCTCATATCTCCACTAG 1641 0.4339 MEDSDSVATLIDSTTSKIQQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFDELEDQEKEFENKTRKAREILEKREAAVFAKEQDSLQRLQEKRDAASFAIVNAREKQRKISSRELATFSNGGKGGMPGVEEKPVDTLSTAAEGNVEDVKLPDNGNVELVSYPELVKLCKEMDAAGLHKFISDNRKNLAAVRDEIPNALRAAPNAACLVLDSLEGFYCTEVSNQDVKKDANLLGLRRTCIMLMECLCDFLSSSGFVSNVISEDIKDRAKAVAEEWKPRLDALDMDASNGNSLEAHAFLQLLASFGIASGFDEEELSRLIPMVSRRRQTADLCRFLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFDLTEQFCPVSLLKSYLKDARKASSPVRSAHSSPTAQIEVNERELVALKAVIKCIEEHKLDEQYPLDPLQKRLVQLEKAKADKKRETEATKPQPKRPRANGVGYGPRVTNILSDKTCYARVADRYPQYVYDRPPYMYPAPTENHCPPLMTTATYNISPSHGNYFGNGYQYQASYLH 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00887 546 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 3 546 - -
Gma03g00887 546 Coils Coil 51 81 - -
Gma03g00887 546 PANTHER FRIGIDA-LIKE PROTEIN 3 546 - -
Gma03g00887 546 Coils Coil 436 456 - -
Gma03g00887 546 Pfam Frigida-like protein 168 457 IPR012474 -
Gma03g00887 546 Coils Coil 94 114 - -
Gma03g00887 546 MobiDBLite consensus disorder prediction 450 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00887 Gma-Chr3 31652924 31659013 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00887 - - gmx:100807523 1082.4