Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00855 ATGGAGTTCAGTTTCGATGAGAAGGACTTTGTGTCGTGCTGCGGGAGCACTAAATTCGCGAAGGAAATGGCTTCGGCCTCTCCTTTCGGTTCGTTGCAGGACGCTGTTTCTGTTGCCAGAGACGTTTGGTTCAACAGCGTTGATGTCAATGGTTGGCTTCAGGCCTTCTCTGCGCACCCTCAGATCGGTCAAAGCCACGCTCCCTCTGTTGCCTCTGAAGCCAGTGCTCAGTGGAGTAAGGGAGAGCAATCAACTGCTTTAGCAACTGCTACTGGTTCGAGCTTACAGGAACTATCTGAATGGAATGCTCGGTACAGGGAAAAGTTTGGGTTTGTATTTCTCATTTGTGCAGCTGGGAGAAGTACTGATGAGATACTTGCTGAACTGAAGAGACGTTATACAAACAGGCCAATTGTTGAATTTGAGATTGCTGCTCGGGAGCAAATGAAAATTACAGAACTACGCCTTGCAAAGCTCTTTTCAAGTAGAGAAAACATTTCTTCTACAGCTGATAAGAATTCCACTGCTAGAAAGGCAGAAGAAGATCGTATAAGCATTATCAGTAGTCACATGACTGCTACTTCAGAGAGTTCAACAGGCAAATCAATTCAGCATCCTGCCAGAACCCGCCCTCCCATTACCACTCACGTGTTGGATGTTTCGCGGGGGGCTCCAGCTGCTGGTATTGATGTACTTCTGGAGGTGTGGAGGGGCACTCAGTCTCAGCCAACATTTGGGGCCACAGGCGGTGGCAGTTGGGTGTTCCAAGGGTCTTCAAAGACGGATTCGGATGGCCGCAGTGGTCAACTGTTGAGCATAGTCGATGAAGCGAGTCCAGGGATATACAGGATAAGTTTCAACACTGGGAAGTACATCCCAAATGGTTTCTTTCCTTATGTGTCTATAGTGTTTGAAATCAAAGAGTCACAAAAAAGGGAACATTTTCATGTTCCTCTCCTACTTTCACCGTTCTCATTCAGCACTTACCGTGGAAGCTAG 999 0.4735 MEFSFDEKDFVSCCGSTKFAKEMASASPFGSLQDAVSVARDVWFNSVDVNGWLQAFSAHPQIGQSHAPSVASEASAQWSKGEQSTALATATGSSLQELSEWNARYREKFGFVFLICAAGRSTDEILAELKRRYTNRPIVEFEIAAREQMKITELRLAKLFSSRENISSTADKNSTARKAEEDRISIISSHMTATSESSTGKSIQHPARTRPPITTHVLDVSRGAPAAGIDVLLEVWRGTQSQPTFGATGGGSWVFQGSSKTDSDGRSGQLLSIVDEASPGIYRISFNTGKYIPNGFFPYVSIVFEIKESQKREHFHVPLLLSPFSFSTYRGS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00855 332 PRINTS Transthyretin signature 212 232 IPR000895 -
Gma03g00855 332 PRINTS Transthyretin signature 310 332 IPR000895 -
Gma03g00855 332 PANTHER 5-HYDROXYISOURATE HYDROLASE 1 332 - -
Gma03g00855 332 TIGRFAM hdxy_isourate: hydroxyisourate hydrolase 212 332 IPR014306 GO:0006144|GO:0033971
Gma03g00855 332 Pfam OHCU decarboxylase 11 157 IPR018020 -
Gma03g00855 332 PANTHER URICASE AND TRANSTHYRETIN-RELATED 1 332 IPR023416 -
Gma03g00855 332 Pfam HIUase/Transthyretin family 213 331 IPR023416 -
Gma03g00855 332 MobiDBLite consensus disorder prediction 189 209 - -
Gma03g00855 332 Gene3D - 6 163 IPR036778 -
Gma03g00855 332 SUPERFAMILY Transthyretin (synonym: prealbumin) 206 332 IPR036817 -
Gma03g00855 332 SUPERFAMILY UraD-Like 12 161 IPR036778 -
Gma03g00855 332 ProSitePatterns Transthyretin signature 1. 216 231 IPR023418 -
Gma03g00855 332 CDD TLP_HIUase 211 332 IPR014306 GO:0006144|GO:0033971
Gma03g00855 332 Gene3D Transthyretin/hydroxyisourate hydrolase domain 202 330 IPR036817 -
Gma03g00855 332 MobiDBLite consensus disorder prediction 247 267 - -
Gma03g00855 332 ProSitePatterns Transthyretin signature 2. 315 327 IPR023419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00855 Gma-Chr3 30841889 30846569 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00855 K13484 - gmx:100805930 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00855 03 30841889 30846569 Gma16g00704 16 8601301 8607118 GST