Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00851 ATGGCTTCAAATTCCAGCACCAACAACGCTGGCTACCCCATCAAAACCATCGTCGTTTTGGTTCAAGAAAACCGTTCCTTTGACCACATGCTCGGTTGGATGAAGTCCCTCGATCCGAAAATCAACGGTATCACCGGTTCAGAGTCTAACCCGATTTCCACATCCAATCCCAACTCGAATCTGGTTCAATTCTCGGACCAGTCGGTCTATGTTGACCCGGACCCAGGTCACTCGATCCAAGACATTTACGAGCAAATCTTCGGAGAGCCTTGGAGCGAAGCCTCAACGGCAAAGAAATTGCCACCGACCATGCAAGGCTTTGCCCAAAATGCCGGGAGGCAAGCAGTGCCAAAGAATGCGACGGCGACGATGATGGAGACGGTAATGAATGGGTTCAAACCGGATTTAATTCCGGTTTATAAAGAGTTAGTTAAGGAATATGCGGTTTGTGACTGTTGGTTCGCTTCGGTTCCCGCTTCGACCCAACCGAACCGGCTCTATGTGCATTCTGCCACGTCACATGGGTTGACAAGTAATGACACCAATAAGCTTATTGGGGGTTTGCCTCAAAAGACGATATTTGATTCTTTGGATGAAAATGGGTTCAGTTTTGGGATCTATTATCAGTCTCCACCCGCCACCCTTTTCTATAGGAATCTTAGGAAACTGAAATACGTAGATAACTTCCGTCCATTCGATTTGTTCAAAAAGCATTGCAAAGAAGGGAAATTACCAAACTACGTGGTGATTGAGCAAAGATTTTTTGACTTGTTATCAATACCAGGGAACGATGATCACCCATCTCATGATGTTTCGGAGGGTCAAAAGTTTGTGAAAGAAGTGTATGAGGCACTAAGAGGTAGCCCACAATGGAATGAAACATTGTTTGTGATTGTATACGATGAGCATGGAGGGTTTTATGATCACGTGCCAACCCCTGTGGAAGGAGTGCCTAGTCCAGATGATATTGTGGGCCCTGAACCATTCAAGTTTCAGTTTGATAGACTTGGTGTGAGGATTCCAGCCATCATTGTTTCTCCATGGATTGAGCCAGGCACAGTGTTACACGGACCTTCGGGACCATCCCCAACATCACAATACGAGCATTCTTCTATACCAGCAACTGTGAAGAAAATATTCAATTTACCTGAATTTCTAACAAAAAGAGATGCATGGGCTGGAACATTTGAAGGTCTTTTAACTAGAAGCAGCCCAAGAACTGATTGTCCAGTGAAATTGCCTGAACCTGTAAAACTACGAGAAGCTCCTGCTCAAGAAAAGGCCAAGTTGAGTGAATTTCAAGAAGAATTGGTACAAATGGCAGCAACTCTGAATGGGGATCATAGAAAGAGTATATACCCCGACAAGTTAACTGAGAACATGAGTGTTCCGGACGCAGTTAAATATGTTGAAGATGCATTCAATACATTCTTGAATGAGTGTGAGAAGGCAAAGCAAAATGGTGCTGATGAGTCTGAAATTGTCGATTGTGCTGATGGATGTAGTAGTGCACCACCCGATTCCAAAAATTTCTTTTACAATGTGCTGTCTTGTATAACATGTAATCGATAA 1572 0.4396 MASNSSTNNAGYPIKTIVVLVQENRSFDHMLGWMKSLDPKINGITGSESNPISTSNPNSNLVQFSDQSVYVDPDPGHSIQDIYEQIFGEPWSEASTAKKLPPTMQGFAQNAGRQAVPKNATATMMETVMNGFKPDLIPVYKELVKEYAVCDCWFASVPASTQPNRLYVHSATSHGLTSNDTNKLIGGLPQKTIFDSLDENGFSFGIYYQSPPATLFYRNLRKLKYVDNFRPFDLFKKHCKEGKLPNYVVIEQRFFDLLSIPGNDDHPSHDVSEGQKFVKEVYEALRGSPQWNETLFVIVYDEHGGFYDHVPTPVEGVPSPDDIVGPEPFKFQFDRLGVRIPAIIVSPWIEPGTVLHGPSGPSPTSQYEHSSIPATVKKIFNLPEFLTKRDAWAGTFEGLLTRSSPRTDCPVKLPEPVKLREAPAQEKAKLSEFQEELVQMAATLNGDHRKSIYPDKLTENMSVPDAVKYVEDAFNTFLNECEKAKQNGADESEIVDCADGCSSAPPDSKNFFYNVLSCITCNR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00851 523 Gene3D Alkaline Phosphatase, subunit A 245 429 IPR017850 -
Gma03g00851 523 Gene3D Alkaline Phosphatase, subunit A 4 190 IPR017850 -
Gma03g00851 523 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 9 503 IPR007312 GO:0016788
Gma03g00851 523 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 9 503 - -
Gma03g00851 523 SUPERFAMILY Alkaline phosphatase-like 171 358 IPR017850 -
Gma03g00851 523 Pfam Phosphoesterase family 14 383 IPR007312 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00851 Gma-Chr3 30738990 30744345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00851 1 519 Acyl Lipid Metabolism Gene Families AT3G03530 61.878 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00851 K01114 - gmx:100805391 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00851 03 30738990 30744345 Gma03g00851 03 30738990 30744345 ECH
Gma03g00851 03 30738990 30744345 Gma16g00708 16 8736280 8741006 GST