Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00762 ATGGGAACAAAGAGGAGCTTCAATTCTCCGGTTAATGTTTTGATTGAAAGGTTGAGGAAGGTTCCAATGAAAGTGAAGATTTTTTGTGGGGTATTGTTTGCTGTTTTTGCTTTGGTGGCCTTAAAGCTCACCATAACAAATCACTACTATTTCTTCATAGCTTCTGAAACGGTCCATGTTGCTGGGATAATTGCCCTCATATACAAGCTTTTTGCCCTGAAGACCTGCACTGGTTTATCGCTTAAGACCCAAGAGCTCACTGCTTTATTCCTAGCAGCAAGATTAAGCTGTAGCACCTTGACAGAGGCCAACATACACACCGCGTTAGATCTGATCTCTCTTTTCGCAACATTATTCCTCATATGGATGATAAGATTCAAGTTAAAGTCATCCTACATCAAGGATCTTGACAACCTGCGTTTATACTTTGTGGTGGTCCCTTCTGCAATCCTTGCGATACTAATCCACCCCTTTACAACTCATTGGCGTTTAGTTCGAATTGTTTGGGCATTCAGTTTGTATTTGGAAGCTGTTTCTGTTCTGCCTCAACTTCGTTTTATGCAGAATGCAAAGATGGTTGAAACATTTACAGGGTATTATGTATTCGCTCTCGGTGTTTCAAGATTCATAGCACTGGCTTACTGGTTAATTCAGATCTATGAGACTCGAGGGGCATATCTATTTTTGGTTGGGAGTGGCTATTTTTGGTTCTTAGCAGCTTTTCTCTCGGAGATGGTTCAATCCTTCATCTTGGCTGACTTTTGTTACTACTACATGAAGAGCTTCATGCAAGGACAAATTTTAAGGAAAATGCCTGTTTAA 822 0.4051 MGTKRSFNSPVNVLIERLRKVPMKVKIFCGVLFAVFALVALKLTITNHYYFFIASETVHVAGIIALIYKLFALKTCTGLSLKTQELTALFLAARLSCSTLTEANIHTALDLISLFATLFLIWMIRFKLKSSYIKDLDNLRLYFVVVPSAILAILIHPFTTHWRLVRIVWAFSLYLEAVSVLPQLRFMQNAKMVETFTGYYVFALGVSRFIALAYWLIQIYETRGAYLFLVGSGYFWFLAAFLSEMVQSFILADFCYYYMKSFMQGQILRKMPV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00762 273 Pfam ER lumen protein retaining receptor 75 217 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma03g00762 273 PRINTS ER lumen protein retaining receptor signature 51 70 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma03g00762 273 PRINTS ER lumen protein retaining receptor signature 78 98 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma03g00762 273 PRINTS ER lumen protein retaining receptor signature 169 189 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma03g00762 273 PRINTS ER lumen protein retaining receptor signature 191 205 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma03g00762 273 PRINTS ER lumen protein retaining receptor signature 205 223 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma03g00762 273 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 8 272 - -
Gma03g00762 273 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 8 272 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00762 Gma-Chr3 27264968 27272313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00762 1 273 Miscellaneous Gene Families AT3G25160 58.608 2.45e-114 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00762 - K10949 gmx:100790733 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00762 03 27264968 27272313 Gma16g00809 16 12695310 12699211 GST