Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00717 ATGTCCGGAGAGCCACGGCCGTTGGAGATCCACCTGAGGGTCAACTCCAAGAGAGGCACCACCATGGTGCACCCCGTGGCGGCGGCGGAGACGGTGGAGGTTCCGATTCAGTACCCCAGAGAGGAAGAAGTGAAGCATTACAGAAAGTGGTTCTCTTGGCTGATACCTCTCTTTGTGGTTGCCAACATTGTTATGTTTGTGATCACTATGTATGTCAATAACTGCCCGCGTAACTCTGTCTCCTGCATTGCCTCCTTCTTGGGTCGCTTCTCCTTCCAGCCCTTCAAAGAAAACCCCCTCTTGGGCCCTTCTTCGTTGACGCTGCAAAAGATGGGGGCTCTTGATGTGAGCAGAGTGGTTCACAGACACCAGGGGTGGCGCCTCATCACTTGTATGTGGCTACATGCTGGGGTTTTCCATCTGTTGGCAAATATGCTGGGTATTCTAGTCATTGGAATTCGGCTTGAGCAAGAATTTGGGTTTGTGCTAATTGGACTGCTATTTGTCATATCTGGATTTGGGGGGAGTTTGCTTTCTGCTCTGTTTATCCAGTCAAACATTTCTGTTGGTGCTTCTGGTGCACTTTTTGGCTTGCTGGGAGGCATGCTTTCAGAACTCATTACTAACTGGTCTATATATGATAACAAGCTAACAGCACTCCTCACCCTTGTGATCATCATTGTTATCAATCTAGCAGTTGGAATTCTCCCACATGTGGACAATTTTGCTCATATTGGAGGCTTTCTTACTGGATTTCTTCTCGGATTTGTGTTTTTGATACGTCCCCAGTTTGGATGGGTTAACCAACGATATGCTCCCCTAAATTATTCTCCAGGACGAGTGAAGCCTAAATTCAAGAAATATCAGTGCATCTTGTGGGTCTTCTCCCTGATCATTCTAGTTGTTGGGCTTTCTGTTGGGCTGGTTGCACTTCTCCAAGGTGTTGATGCAAATGATCACTGTTCCTGGTGCCATTATCTGTCTTGTGTTCCAACTTCAAAATGGAGCTGCCATACAGAGGCAGCATATTGTCAGTCAAACCAACTTGGCAACCAGTTGAACGTAACATGCTCAAGCAATGGTAAATCCAGTACATACTTCATGCAAAATCCAACCAGTTCCCAGATCCAGCAATTGTGTACTCAACTTTGTAGTTGA 1158 0.4655 MSGEPRPLEIHLRVNSKRGTTMVHPVAAAETVEVPIQYPREEEVKHYRKWFSWLIPLFVVANIVMFVITMYVNNCPRNSVSCIASFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSRVVHRHQGWRLITCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFVISGFGGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWSIYDNKLTALLTLVIIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRVKPKFKKYQCILWVFSLIILVVGLSVGLVALLQGVDANDHCSWCHYLSCVPTSKWSCHTEAAYCQSNQLGNQLNVTCSSNGKSSTYFMQNPTSSQIQQLCTQLCS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00717 385 SUPERFAMILY Rhomboid-like 50 263 IPR035952 -
Gma03g00717 385 Gene3D - 47 261 IPR035952 -
Gma03g00717 385 PANTHER RHOMBOID-RELATED 17 384 IPR002610 GO:0004252|GO:0006508|GO:0016021
Gma03g00717 385 PANTHER RHOMBOID-LIKE PROTEIN 4 17 384 - -
Gma03g00717 385 Pfam Rhomboid family 120 261 IPR022764 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00717 Gma-Chr3 23313519 23319031 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00717 - - gmx:100801675 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00717 03 23313519 23319031 Gma03g00717 03 23313519 23319031 ECH