Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00693 ATGAAACCGTGCTTGCGGACAAAGCCTCTTCTTCTTCTGCTCTCTCTGCTACTTCTCCACAACATCACATTCGTTCTCTCCGATGATTCCAGCAGGAAAAACACCTTCCGCGAGCGCGAAGCCTCCGACGACTCCCTCGGATACCCCGAAATAGATGAGGATGCACTTGTGAATTCAAAGTGCCCCAAGAATTTGGAGCTCAGATGGCAAACAGAAGTTAGTTCCAGCATCTATGCAAATCCCTTGATTGCTGATATTAACAGTGATGGGAAGCTTGAGATTGTGGTTCCGTCTTTTGTTCACTACCTTGAGGTTCTAGAAGGTGCTGATGGGGACAAAATGCCAGGCTGGCCTGCTTTCCACCAATCAACTGTGCATTCTAGTCCTCTTCTATATGACATTGACAAAGATGGAGTGAGAGAAATAGCTTTGGCAACCTACAATGGTGAAGTGCTGTTTTTCAGGGTTTCGGGCTATATGATGTCAGATAAGCTTGAAGTTCCGCGTAGGAAGGTGCTAAAAAAATGGTTTGTGGGCTTGGATCCTGACCCAGTGGACCGTTCTCATCCAGATGTTCATGATGACCAACTTGTCCAAGATGCTACTATCAAGAATTCTATGTCTCAAATGAATGGAAGTAGACATGAAGCCAAATCTTCAGCTGCCACATCAACAGAAAACCACCTTGAGACAAAAAATTTGTCCaatcctgagccagaaaagaaaataaatggtagtcaagtagatgagagtattaaggtgcctaatcctgagccagaaaagaaaataaatggaagtcaaatagatgagattattaaggtgcctaatcctgagccagaaaagaaaataaatggaagtcaagtagacgagagtattaaggtgccAACTGTTGTGGATAATTCCTCTGTGAATGCTGGGTCTCTGGAAACTGTTCATGCTGATAATAAAACCAGCACTGGGAGACGTCTTCTGGAAGATAACAATTCCAAAGGAGCAGTGCAAGGCAGTTCTGAATCCAAAGTTAAAGAGGGTATTCATGCTGCAACTGTGGAAAATGATGAAGGCCTGGATGCAGATGCTGATTCATCTTTTGAGTTATTCCGTAATAGTGAAGATCTGGCTGATGAGTATAGTTATGATTATGATGATTATGTTGATGAAACAATGTGGGGTGATGAAGAATGGACTGAAGTTAAACATGAAAAATTAGAAGATTATGTGAATGTTGACTCACACATCTTGTGCACTCCTGTCATTGCTGATATCGACAATGATGGTGTTTCAGAAATGATTGTTGCCGTTTCTTATTTCTTTGATCACGAGTATTATGACAACCAGGAGCATCGGAAAGAACTGGGTGATATTGACATTGGGAAATATGTTGCTGGTGGTATTGTTGTTTTTAATCTGGATACGAAACAAGTTAAATGGACTGCAGAACTTGATCTGAGTACAGATACTTCAAACTTCCGTGCCTACATATATTCTTCCCCAACTGTTGTAGATTTGGATGGTGATGGGAATCTTGACATTCTTGTTGGAACTTCATATGGCCTGTTTTATGTGTTAGATCATCATGGTAATGTTAGACAAAAGTTTCCTCTTGAAATGGCTGAGATTCAAGGAGCTGTTGTTGCGGCTGATGTTAATGATGACGGGAAAATTGAACTAGTTACAGCTGATACACATGGAAATGTTGCTGTATGGACTCCAAAAGGAGATTTAATATGGGAAAAACATCTAAAGAGTCTTATTCCACAGGGTCCTACTGTTGGTGATGTTGATGGGGATGGCCATACTGAGCTTGTTGTGCCAACACTATCTGGGAAGATTCATGTTCTTGATGGCAGGGATGGGTCATCTATTGGGCGGTATCCATATCAAACTCATGGAAGAATAATGAATCAAGTTCTTCTAGTCGATTTAAGTAAAGACAAGGAGAAAAAGAAGGGATTAACTATTGTTACCACATCATTTGATGGTTATTTGTACCTCATTGATGGACCTACTGGATGTGCTGATGCTGTTGACATTGGTGAAACTTCGTATAGCATGGTCTTGGCAGACAATGTTGATGGTGGGGATGATCTTGATCTAATTGTCACAACAATGAATGGCAATGTCTTCTGCTTCTCAACCCCATCTCCTCATCATCCCCTAAAGGCAGGATATGCATGGAGATTGCCTAGTCAAGGAAGAAATAATCTTGCAAATCGTTACAGTCGTGAAGGTATCTATGTTACTCATCCTTCTAGGGCATTCCGCGATGAGGAAGGCAAAAGCTTTTGGGTGGAAATTGAGATTGTAGATAACTACAGATACCCATCTGGGCATCAAGGACCGTACAAAGTCACTACTTCCTTGCTCGTACCTGGTAATTACCAAGGAGAGAGAACGATAAAGTTGAACAATACCTATGGTCAACCTGGTAAATATCGGATTAAGCTGCCAACTGTGTCGTGGCTTCTTGTTCTTCCAATGCTTGGGATGTTTGGTGTGCTTGTAATCCTTCGCCCACAAGGCTCAATGCCATTGCCATCTTTTTCAAGGAACAATGATTAA 2562 0.3895 MKPCLRTKPLLLLLSLLLLHNITFVLSDDSSRKNTFREREASDDSLGYPEIDEDALVNSKCPKNLELRWQTEVSSSIYANPLIADINSDGKLEIVVPSFVHYLEVLEGADGDKMPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYNGEVLFFRVSGYMMSDKLEVPRRKVLKKWFVGLDPDPVDRSHPDVHDDQLVQDATIKNSMSQMNGSRHEAKSSAATSTENHLETKNLSNPEPEKKINGSQVDESIKVPNPEPEKKINGSQIDEIIKVPNPEPEKKINGSQVDESIKVPTVVDNSSVNAGSLETVHADNKTSTGRRLLEDNNSKGAVQGSSESKVKEGIHAATVENDEGLDADADSSFELFRNSEDLADEYSYDYDDYVDETMWGDEEWTEVKHEKLEDYVNVDSHILCTPVIADIDNDGVSEMIVAVSYFFDHEYYDNQEHRKELGDIDIGKYVAGGIVVFNLDTKQVKWTAELDLSTDTSNFRAYIYSSPTVVDLDGDGNLDILVGTSYGLFYVLDHHGNVRQKFPLEMAEIQGAVVAADVNDDGKIELVTADTHGNVAVWTPKGDLIWEKHLKSLIPQGPTVGDVDGDGHTELVVPTLSGKIHVLDGRDGSSIGRYPYQTHGRIMNQVLLVDLSKDKEKKKGLTIVTTSFDGYLYLIDGPTGCADAVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKAGYAWRLPSQGRNNLANRYSREGIYVTHPSRAFRDEEGKSFWVEIEIVDNYRYPSGHQGPYKVTTSLLVPGNYQGERTIKLNNTYGQPGKYRIKLPTVSWLLVLPMLGMFGVLVILRPQGSMPLPSFSRNND 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00693 853 PANTHER - 820 852 IPR045232 -
Gma03g00693 853 PANTHER - 11 820 IPR045232 -
Gma03g00693 853 MobiDBLite consensus disorder prediction 207 263 - -
Gma03g00693 853 PANTHER PROTEIN DEFECTIVE IN EXINE FORMATION 1 820 852 - -
Gma03g00693 853 Pfam FG-GAP-like repeat 548 604 IPR013517 -
Gma03g00693 853 SUPERFAMILY Integrin alpha N-terminal domain 69 645 IPR028994 -
Gma03g00693 853 Gene3D - 327 718 IPR015943 GO:0005515
Gma03g00693 853 MobiDBLite consensus disorder prediction 207 232 - -
Gma03g00693 853 MobiDBLite consensus disorder prediction 233 247 - -
Gma03g00693 853 PANTHER PROTEIN DEFECTIVE IN EXINE FORMATION 1 11 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00693 Gma-Chr3 21876799 21885557 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00693 - - gmx:100805038 1680.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00693 03 21876799 21885557 Gma03g00693 03 21876799 21885557 ECH