Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00689 ATGATGGGGGAAGGAGCGAGCAATGGAGGGATGCTGTACCACGAGGTGCAGGAGTCGAAGCTCTGCGCGGTGCATTGCGTGAACACGGTGCTGCAGGGCCCGTTCTTCTCGGAGTTCGATTTGGCCGCGCTCGCCTCCGATCTCGACCGCAAGGAGCGCCAGGTCATGCTCCCCGCGCTCTCCTCGGCGGATTTCGAATCGCACAATGTCTCGCTCGACGGCGATTTCAGCATCCAGGTTTTACAAAAGGCTCTGGAAGTGTGGGACCTACAAGTTATCCCTCTTGACTCTCCAGTTGCTGAGCCTGCCCAGATTGACCCTGAGCTGGAAAATGCCTTCATTTGTCATTTGCAAGACCATTGGTTTTGTATCCGTAAAGTGAACAGGGAGTGGTATAATTTTGACAGTCTCTATGCAGCCCCACAGCACCTTTCCAAGTTTTACCTCTCTGCCTATCTTGACTCTTTGAAAGGCTTTGGGTGGAGCATATTCCTGGTTAGAGGAAATTTTCCAAAAGAGTTCCCCATCTCCTCATCTGAAGCTTCTAATGGATTTGGGCAGTGGCTTTCACCCGAAGATGCTGAGAGGATAACTAAATCTTGCAACTCAGTACAGGCTCCACACCAGAGAGTTAACGAGCGCCAACAGAATTATGATCAGTTTCTTTCTCATGGGGAAACCGAAATGCTATTAGACATGGAAGATGAGGATCTAAGGGCTGCAATTGCAGCTAGTCTGATGGATTCATCCCCAGTTGTGACAAATGCTGAAGCCAGTACTCCTCAAAATGATAATCAAAGTAGTAAACAAGTGGCAACCACTGAAGCTACCCCTCTAAATGATCAACACTCCAAACAAGTGGAACCCATTGAAGCCACTCCGCCTCTCAATGCTCAAAGCAACAAACATTTGCCTGCTACTGAAGCTGGTTCTCCTCTGAATGATCAAAACAGCAAAGAAGTGGCATCTACTATAGGTGATAACGCTCAAGATGATAACCAGAAAAAATAA 1011 0.4817 MMGEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQVMLPALSSADFESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICHLQDHWFCIRKVNREWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFLVRGNFPKEFPISSSEASNGFGQWLSPEDAERITKSCNSVQAPHQRVNERQQNYDQFLSHGETEMLLDMEDEDLRAAIAASLMDSSPVVTNAEASTPQNDNQSSKQVATTEATPLNDQHSKQVEPIEATPPLNAQSNKHLPATEAGSPLNDQNSKEVASTIGDNAQDDNQKK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00689 336 SMART Josephin_2 16 169 IPR006155 GO:0004843|GO:0016579
Gma03g00689 336 MobiDBLite consensus disorder prediction 253 329 - -
Gma03g00689 336 PANTHER ATAXIN-3-RELATED 1 303 IPR033865 GO:0004843|GO:0016579
Gma03g00689 336 Gene3D - 35 73 - -
Gma03g00689 336 Pfam Josephin 17 167 IPR006155 GO:0004843|GO:0016579
Gma03g00689 336 PRINTS Josephin signature 13 36 - -
Gma03g00689 336 PRINTS Josephin signature 107 126 - -
Gma03g00689 336 PRINTS Josephin signature 128 148 - -
Gma03g00689 336 PRINTS Josephin signature 152 171 - -
Gma03g00689 336 PANTHER ATAXIN-3 1 303 - -
Gma03g00689 336 MobiDBLite consensus disorder prediction 253 336 - -
Gma03g00689 336 Gene3D - 21 171 - -
Gma03g00689 336 ProSiteProfiles Josephin domain profile. 9 181 IPR006155 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00689 Gma-Chr3 21759224 21763495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00689 K11863 - gmx:100808056 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00689 03 21759224 21763495 Gma03g00689 03 21759224 21763495 ECH