Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00579 ATGTGGTGGGGTCCTATTGAACATGGGCGTGGAAAATTCAAGGGTGGACTTAGTGATGATACACAAGCCCCCAGCTCAGCGCTCTCTGGAGGCTATTTAATTGCATCAATGGGACTTCAAGTGCTCTGGAGCTTTGGACTCGCATGCCTTGATATTTATGCTTTGAGGAGAAAGAGAGACCTACAAAATCCAATTCTTGTCAGCCTGTTTGTTGTTGGTGATTGGGTAACAGCGACTTTGTCACTTGCTGCCGCATGCTCATCAGCTGGAATCGTAGTATTATATGCAAGAGACCTGACTGTATGTGCGACTAGTAAGCGTCTCACGTGCAACAGGTACCAGGTTTCTGTAGCCATGGCTTTTCTCACCTGGGTTCTCACAGCGATGTCATCGCATGTGATGTTCTGGATCTTGGCCTCAGTCTAG 426 0.4765 MWWGPIEHGRGKFKGGLSDDTQAPSSALSGGYLIASMGLQVLWSFGLACLDIYALRRKRDLQNPILVSLFVVGDWVTATLSLAAACSSAGIVVLYARDLTVCATSKRLTCNRYQVSVAMAFLTWVLTAMSSHVMFWILASV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00579 141 Pfam Casparian strip membrane protein domain 32 126 IPR006702 -
Gma03g00579 141 PANTHER CASP-LIKE PROTEIN 31 141 - -
Gma03g00579 141 PANTHER CASP-LIKE PROTEIN 5B3 31 141 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00579 Gma-Chr3 16535435 16538775 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00579 - - gmx:100793181 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00579 03 16535435 16538775 Gma03g00579 03 16535435 16538775 ECH