Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00553 ATGAAAATGGGTAGGTGGCATATTCTTGAAGTAAATGAAGACCATAGACTACGTGTCTTCATGGTTTTCAATCAAGAACGAAAGGTTTTCGGTTTTCCAAAGGAAATGAAGAATGAGGATCAGATCACACAACAGGCTCAGAGACCAAAATATGATTGCCTTCTATTTGATTTAGATGATACTTTGTATCCTCTCAATTCTGGTCTTGCAAATGCAATTGACAAAAATATTAAAGACTACATGGTCGAGAAGCTTGGCGCAGAACCAAGTAAAACTGGTGAATTGGTCAACCTCCTTTACAGTAACTATGAAACTACTATTGCTGGTCTAAGGGTATCATTTCCTTCTATTGGGTATGACATTGACTATGAAGAATATTACAGTTTTGTTCATGGGAAATTACCTTATGAGAACTTAAAGCCAGACCCAGTTCTGAGGAATCTGCTGCTGAGTCTCCCCTATAGAAAGCTTATTTTCACAAACTCAGACAAAGTCCACACGATTAAGGCACTTGAAAGACTTGGGTTGGAAGACTGCTTTGAAGGAATAATATGCTTTGAGACCCTTAATCCTATCCAAAAGAGCACTGTTTTTTATTATGAAGATGACGTAAAGTTTGAGGGTTCAAAGAGCATAAGTCCAACACCCAAAAATGGTGTAGAAAGCTCTGAAATCTTTGACATCATAGAGCATTTTGCTCAACCTGTACCCAGTGCAGTCCTGCCAGAGACACCAATTATCTGCAAACCATCAGGACATGCCATTAAATTGGCCCTCAAGATGGCCAACCTTAACCCACAAAGAACCTTGTTCTTTGAGGATAGTGTCCGCAACATACAATCTGGAAAACGATTGGGCCTTCACACTGTGCTGGTTGGTAGATCCTACAGGGTTAAAGGTGCTGATTATGCCATGGAAAGCATTCACAACCTTAAGGAGGCAGTGCCTGAACTGTGGGACGCTGACATAAAAGCACAAGTTGAATGCCCGGGAACTGAGAAGCTTGCAGTGGAGACATCAGATATAGTTTGA 1032 0.407 MKMGRWHILEVNEDHRLRVFMVFNQERKVFGFPKEMKNEDQITQQAQRPKYDCLLFDLDDTLYPLNSGLANAIDKNIKDYMVEKLGAEPSKTGELVNLLYSNYETTIAGLRVSFPSIGYDIDYEEYYSFVHGKLPYENLKPDPVLRNLLLSLPYRKLIFTNSDKVHTIKALERLGLEDCFEGIICFETLNPIQKSTVFYYEDDVKFEGSKSISPTPKNGVESSEIFDIIEHFAQPVPSAVLPETPIICKPSGHAIKLALKMANLNPQRTLFFEDSVRNIQSGKRLGLHTVLVGRSYRVKGADYAMESIHNLKEAVPELWDADIKAQVECPGTEKLAVETSDIV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00553 343 Gene3D - 119 319 IPR023214 -
Gma03g00553 343 SFLD Haloacid Dehalogenase 45 320 - -
Gma03g00553 343 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 52 292 IPR010237 -
Gma03g00553 343 SFLD C1.5.3: 5'-Nucleotidase Like 45 320 IPR010237 -
Gma03g00553 343 SUPERFAMILY HAD-like 49 318 IPR036412 -
Gma03g00553 343 Pfam Haloacid dehalogenase-like hydrolase 54 189 IPR041492 -
Gma03g00553 343 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 36 341 - -
Gma03g00553 343 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 36 341 - -
Gma03g00553 343 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 247 292 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00553 Gma-Chr3 12435435 12439263 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00553 K07025 - gmx:100790020 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01241 07 16176219 16179539 Gma03g00553 03 12435435 12439263 PCT
Gma03g00553 03 12435435 12439263 Gma07g01241 07 16176219 16179539 PCT