Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00528 ATGACACAACAACCGGACTTCAGTTGGATGGTTCCCATTGAAGTGATGCTGGGTGCCCTCTACCACGGACAAGTCCAAGCCTGCAGCATCTCAAGCGTCACGGACGAGCTTCGAAGCCCGAACGAGGCGGCTTTCAAGCCAAAGGAGGTCTCCATAGGACCCTTGCACAGAGGAACCACGAGGCACGTGCAGCTAATGGAAGAGACAAAATGGCATTACATGCGCGAATTTCTCGACAGAAGAGGCACGCAGGAGCAGAACAGAAGATCGGAGCGGAGGCTCAGAGAGTGTGGCACCGATATCCTCAAGCTGGATAAGATAATCATGGCATGCTATGGAGGTAACATCAGATCAGAACCGCAAGAGTTGGCTAAAATAATGATTGTAGATGGTTGTTTTCTGTTGGAACTCCTTATCAGGCTTGGTGATTTTATATGTAACAATAGTAGTAGTTATGCAAATGACCCTATACTGAAAAATGAGGAGAAGATGGTGTCTGTTCTGAATGATATCACATTGCTTGAGAACCAAATTCCATTCATTGTTCTCAAGAAGTTGTATAGGAAGGTCTTTCCCGATGGCAGTGACATCAACAACGATAACCGGGTTGCTGATATCGTTTGCAAAGCTTTTGGTTACACTGAGGTGAAAGCCCCGGTCCACATACTTCACTTGATGCATTTGTCCACAGTTGAACAGACTCAGCAAGAGGGTAAACGCGTGGAGCAAGAACTATTGCGCTGCGCCACGAGACTTCAAGCTGCAGGAGTAGAAATTAAAGCTGCAAACACCATTGCTCGCCATAAGTTGGTGGATTGGTTCAATTTTGAGATAAGTTTCAGTGACAGCGTGTTGCGGATTCCACCGCTGTATGTTAAGGACACTACAGAAGTGAGGTGGAGGAATTTGATCGCGTGGGAGCAGAGCAGAATTTGGATCAGATGTAAATACACTTCGTATGCATTGTTCTTTCAAGGTTTGGTTTGTTGTAAGCATGACATTGAGCTGCTTGAGAAGAATGGGGTGATAGTGAACAAGGCCGGGAAGAGCACTGATGAACTGCTGGATCTGTTTCGAACGATTGCGAAGGGAGCAGAGTACATGGATTCGAGCTATAGCGAAATTGGTGCGAGGTTGAACATGTACAACAGGGGAAAAATCACAACTGCATTTCAAGGATTGCCTGTAGTCACTTGGCACAAGTGCAGACATGTTTTGCAGATCATTGTTTACTATTGGGGAAACTGGTACAGAATTTTGATACGCGATCATATTCCCACGGTGTGGAAATTCATAGGAGTGTTGGCAGCTGCTGCACTTCTTGTTCTCACAATTATGCAAACCTATTACTCATCCCGCAATAAAGACTGA 1371 0.4566 MTQQPDFSWMVPIEVMLGALYHGQVQACSISSVTDELRSPNEAAFKPKEVSIGPLHRGTTRHVQLMEETKWHYMREFLDRRGTQEQNRRSERRLRECGTDILKLDKIIMACYGGNIRSEPQELAKIMIVDGCFLLELLIRLGDFICNNSSSYANDPILKNEEKMVSVLNDITLLENQIPFIVLKKLYRKVFPDGSDINNDNRVADIVCKAFGYTEVKAPVHILHLMHLSTVEQTQQEGKRVEQELLRCATRLQAAGVEIKAANTIARHKLVDWFNFEISFSDSVLRIPPLYVKDTTEVRWRNLIAWEQSRIWIRCKYTSYALFFQGLVCCKHDIELLEKNGVIVNKAGKSTDELLDLFRTIAKGAEYMDSSYSEIGARLNMYNRGKITTAFQGLPVVTWHKCRHVLQIIVYYWGNWYRILIRDHIPTVWKFIGVLAAAALLVLTIMQTYYSSRNKD 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00528 456 Pfam Plant protein of unknown function 30 443 IPR004158 -
Gma03g00528 456 PANTHER DUF247 DOMAIN PROTEIN 2 455 - -
Gma03g00528 456 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 2 455 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00528 Gma-Chr3 10269287 10271290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00528 - - gmx:102665561 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00528 03 10269287 10271290 Gma03g00528 03 10269287 10271290 ECH
Gma03g00528 03 10269287 10271290 Gma01g01158 01 41189428 41191351 GST
Gma07g01355 07 18059215 18060733 Gma03g00528 03 10269287 10271290 PCT
Gma03g00528 03 10269287 10271290 Gma07g01355 07 18059215 18060733 PCT