Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00465 ATGGGGGACTTCAACCTGGCGCTGGTGATCGTGGCGATCGTGGTGTGCGTCATCGTGTTCCTCTTCAACGTCTACCTCCTCGTCAACTTCCAGCACCCCGACGACGTCAACCAGGCCTACTTCCCTAAATTCGTCGTCGTCCTCGGCCTCTCTGTCGCCGCTATCTCCATTCTCATGCTCCCCGCCGACGTCGCCAACCGCCAGGCCTGCCGCCATGCCATCTACAATGGCGCCTGCAGCCTCACGCTCCCCATGAAGGACCTCTGGCTCGCAATTTACATCCTCGACGCCGTCCTCGTCTTCTTCGTCATCCCCTTCGCCATGTTCTACTACGAAGGCGACCAGGACAAGAGTGTTGGGAAGCGGATTAAGAGCGCCTTGTTGTGGATGGTGACCACTGCCATTGTGTGCGCTCTTGTTTTGGGGATTTTATATGGACTTATTGGGAAGGTGGACTTTACTGTTAGGCATCTCTCTTCTTCCACAAGCCAATTTCCTAGCACATGGGACTTCAATagtggtcaacaatgtattggaagcacacatcagTGTTCTGCATTCACTGCCAGTCCTTTATCAGAGAAAACATGGACCATGCGTACTACCTTTCCAGAATATGTTGTTGCTCTTGCCACTATTGTTGGATCTGTGCTTTTTGCTATATTTGGTGGTGTTGGTATTGCTTGTCTTCCATTGGGACTTATATTTTCATTCATTCGACGTCCAAAGGCTGTTATCACTCGTTCACAGTATATCAAGGAAGCAACTGAACTGGGTAAAAAAGCAAAAGAACTGAAGAAAGCAGCTGAATCACTTCATCAGGAAGAAAGAAGTGGTTCGAAGGGTAGGAAATTTCGTAAAAATGTGAAATCAGTAGAAAAGGAGTTGTTTCAATTAGAAGAAGATGTCAAGCTTCTTGAGGAGATGTATCCACAAGGGGAAAAGGCTGAGACAACATGGGCACTAACAGTTCTAGGGTATCTGGCAAAATTCGTTTTGGGAATATTAGGGCTTATTGTTTCTGTGGCATGGGTTGCTCATATCATTATCTATCTATTAATTGACCCTCCTCTTTCTCCTTTCTTGAATGAAGTTTTCATCAAGTTGGATGATATCTGGGGTCTTCTGGGTACAGCTGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGAGCCATGATGCTTGGGCTGAGACTAGTTTTCATTACTATACATCCCATGAAGTGGGGAGCGACACTCATGAACTCTTTTCTGTTCAATGTGGGGCTTATTCTTCTTTGTTCCATTAGTGTGATCCAGTTCTGCTCCACAGCATTTGCCTACTATGCTCAAGCAACTGCAGCACAGGAAATATTTGGCCACACCTTGGAGTCTCTTCGTGGAATTAAATATTTGTACAAGTACAACGTCTTTCAGATTGCATTCGTTGCATTGGCTGGATTGACTTTTGTATATTATGCTGCCTTTGGATGGAGAAGAAAGAAGCCTAGTGGCAGGTTCCAATTGTCTTCATAA 1527 0.4492 MGDFNLALVIVAIVVCVIVFLFNVYLLVNFQHPDDVNQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACSLTLPMKDLWLAIYILDAVLVFFVIPFAMFYYEGDQDKSVGKRIKSALLWMVTTAIVCALVLGILYGLIGKVDFTVRHLSSSTSQFPSTWDFNSGQQCIGSTHQCSAFTASPLSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKELKKAAESLHQEERSGSKGRKFRKNVKSVEKELFQLEEDVKLLEEMYPQGEKAETTWALTVLGYLAKFVLGILGLIVSVAWVAHIIIYLLIDPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVALAGLTFVYYAAFGWRRKKPSGRFQLSS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00465 508 Pfam LMBR1-like membrane protein 9 277 IPR006876 -
Gma03g00465 508 Pfam LMBR1-like membrane protein 285 486 IPR006876 -
Gma03g00465 508 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 508 - -
Gma03g00465 508 Coils Coil 248 275 - -
Gma03g00465 508 Coils Coil 289 309 - -
Gma03g00465 508 PANTHER BNAC05G43630D PROTEIN 1 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00465 Gma-Chr3 8305872 8312234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00465 K14617 - gmx:100800757 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00465 03 8305872 8312234 Gma03g00465 03 8305872 8312234 ECH
Gma18g01845 18 51063756 51069101 Gma03g00465 03 8305872 8312234 PCT
Gma07g01384 07 18331686 18342757 Gma03g00465 03 8305872 8312234 PCT
Gma03g00465 03 8305872 8312234 Gma18g01845 18 51063756 51069101 PCT
Gma03g00465 03 8305872 8312234 Gma07g01384 07 18331686 18342757 PCT