Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00459 ATGGTCGGAAAAACAATGTCCATGGCGGCGACTTCCCGCGAAAAGCTGGCGAGTCTCGTGAACGCCGCCAAGCTGGCCATCGACATCCCTTCGAAGCTAGAATCGCTGCGCCAACTCCGCCACGAACTTCCCCCCGAAGACCCCGTTCTCCTCACCGAGTTCCTCCCCTCGCTCTTCCTCTTCCACTCCGATCGCTTCGGCCCCGTTCGCAAATTCCTCACCGAGATGCTTGGGGAGATTGGATTGAAGAACACAGAGTTCTTGTCCAACATTGTGCCTGTGCTTATTGATTTATTGGATGACGACACGCCGGCGGTTGTTCGCCAAGTTCTACTGTGCGGAACTGACTTGTTTCGCGCCACTCTTGAGAAAATTGTGGTTCAGGGTCTATACTCTAGTGATTTAGATGGTGCCCTTGAATCTGCTTGGGCATGGATGCTTAAATTCAAAGACAAAGTGTACTCAATAGCTTTTCAACATGGAAGTGGTGGCGCAAAGCTGCTGGCACTGAAGTTTGTTGAGGCAGTTATTCGTCTTTACACACCTGATCCCAATGGTTCCTCAGAGCCCACTTCTCATCAAGGAAGGCCTGTGGAATTTAATATATTATGGCTCAGGCGGGGTCATCCTGTACTTAACATTGGAGATTTGAAAATTGAAGCCAGCCATCGTTTGGGTCTCTTGCTTGATCAACTCAGATTTCCAACTGTGAAGTCCCTTAGTAACTCAGTAATCATTGTGCTGATTAAAAGTCTATCAGCCATTGCATTTGACAGGCCTGCATTCTATGGCCGCATCTTGCCAGTTTTGCTCAGTTTGGAACCTTCCAGCTCTGTTGTTAATGGGGTCTGTGTATCAGCTACACATTTTGCTTTGAAGAATGCCTTTGTTACTTGCTCGAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCAGAGGCCTTGAAGGAAATGCAGTCAGAAGGAAAGGCAGATCGGGTGTTCCACCTAATCTCTGCTAGTAATGGAACCATAGAGAGAGAGAAAGATGATCAACCTGTTATCAAGGAAGAGGAACCTGCAACAAATTCTGGCGATTCAGTGCAGAATAATTTGGCAAGAAAACGATCAGGATCACAAATTGGAGGTGATTTAGCTGAAGATGAAGAAACTCCTGGAAAACGGGTCAGGACAACTGTTGTTGCTTTGGAAGAGCCTAAGGAGTTAGATGAATGTACCACTACCTACTCTCAGGATGAGACTCCAACTGTACCAACATCTTCAAAAGGAGATGTGGATAATGGGCCTGTACGGCAACTTGTTGCCACATTTGGTGCTTTGATTGCTCAAGGTGAAAGAGCTGTTGGACATTTGGAAATTCTCATCTCAAGTATTTCTGCTGACTTGCTAGCTGAGGTGGTGATGGCAAATATGCAAAACCTACCTCTGAATTACCCTAATGCTGAAGGAAATGATGAACAGCTGCAAGACATTAGTATGATTGGTTCTGATGACAAGGCTAAATATCCACCATCATTTGTAGCTGCTGTTATGTCACTTTCTAGTACTTTCCCGCCAATAGCTTCCCTTCTTGATGCGCATCAATCAGTGTCCAATGAGGTAGTGAAGTCACAAGTGGAGGAAGAAATTTCTGCAACTGCTGCAAATAGTGGTGCTGTGGATTCTGGCATGAATATTGAATCTGAAAATATACCATCGCCTATTGATTTTCCATCTTCTGATGCCAGTATACCTGGAGTAGAGAATGGCTGCACAACTATGCCTCCTGACATCCATGATGTTGGAAACTCAGAGAGTGGAATCCCTGGCCTAGATTCTTTTGGTCGTAGTGATTCTGTGTCACAAACTTCTGCTCCTTCCTTATTGGTTTCCACTGAAATATGCCTAGAAGATGGCAGTCAAGAGCAGGATACAAGTTTGGATCAGAGGTCACCTCTGAACGTAGCTCCATCAATATCAACAGATAGGTCTGAGGAGCTGAGCCCAAAAGCGGCTGTTAGAGATGTCAATAGCTTGGTGTCCTCAACAGCTACTTCAGTTGTGCCTCCCCGATTAGTCTTGCCAAAGATGATTGCTCCTGTTGTTGACCTTGAAGATGAACAAAAGGATCATTTGCAAAAGTCATGTTTTATGCGTATTATTGATGCATATAAGCAAATAGCTGTAGCTGGAGGCACCAACATTCGTTTTTCGATACTTGCTTATTTAGGAGTTGAGTTTCCCTTGGAATTAGACCCGTGGAAACTATTACAGAAGCATATTTTGATTGATTACATTAGTCATGAGGGACATGAGTTGACATTGCGTGTCCTCTACAGATTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACAACAGCAGCTTCTGTATATGAAAATTTCCTCCTTACAGTGGCAGAAGCACTTAGAGATTCCTTTCCACCTTCAGATAAATCATTAAGTAAATTGCTTGGTGAATCTCCTTATTTACCAAAATCAGTTCTGAAAATTTTAGAAAACATGTGTTCTCCTGGAAATGGGGATAAAGGTGAAAAGGAGTTGCACTCACTGAATGCAGATAGAGTTACTCAAGGTCTAAGTACTGTATGGAGTTTGATTCTTCTAAGGCCTCCCATTCGAGATACTTGCTTACAAATTGCTCTACAGAGTGCAGTGCATCATCTGGAAGAAGTGCGTATGAAGGCGATACGTCTGGTGGCAAATAAGCTTTATCCTTTGTCATCCATTTCTAAGCAAATAGAAGATTTTGCAAAGGAAATGCTTTTCTCAGTGATGAGTGGGGATGCATCTGAAGCTACTGATATTGAATGTTCCATTGCTGATTCAGAAAAGGGACCTGATGTTGAGAAGGTTCCAAACGAACAATCATCATTGAGTGGCAGCACTAAAGATGTCACCTCAGATAATCGTCAATCATGCACATCTGAGAGTGTCTCACCAGATTCAGTTTCTGAGGCTCAGAGGTGCATGTCATTGTATTTTGCTTTGTGTACAAAGAAACATTCTCTCTTTCGCCAAATATTTGTCATCTATAGAAGTACATCAAAGGCAGTGAAGCAGGCAGTACATCGCCAAATTCCAATACTAGTACGTACTATGGGCTCATCTTCAGATCTCCTTGAAATTATTTCAGATCCCCCAAATGGAAGCGAGAATCTTCTAATGCAGGTATTGCAAACACTTACAGATGGTACGATCCCTTCTAAGGATTTAATATGTACTGTGAAAAGGTTGCATGATTCAAAACTCAAGGATGCAGAGTTTCTTATTCCGATATTACCATTCCTATCAAATGATGAGGTAATGCCCATTTTTTCTCACATTGTGAATCTTCCTTTAGAGAAGTTCCAAGCGGCACTTGGGCGCATATTACAGGGATCATCACAATCAGGTCCAGTTCTTACTCCGGCTGAAGTTTTAATTGCAATTCATGGAATTGATCCTGAAAAGGACGGAATTGCCTTGAAAAAGGTCACAGACGCATGCAATGCTTGCTTTGAGCAGCGGCAAACTTTTACTCAAGAAGTTCTTGCCAGAGTTTTGAATCAGTTGGTTGAGCAGATTCCTCCTCCTTTACTGTTCatgcgtactgtattacaagcaattggtgcttttccaacactgGTGGACTTTATAATGGGGATTCTTTCTCGCCTTGTGACGAAGCAGGTGAATATATTATTGTTATCTGTTTTTGTAATTTATTCAATTCTTGAGTGTACTTGTATATCAAATGAACTGCTACAGATATGGAAATACCCTAAGTTGTGGGTGGGATTCTTGAAGTGTGTGCAGTTGACAAAACCACAGTCATTTGGCATTTTGCTTCAGCTGCCTCCAGCACAATTGGAAAATGCATTAAATAGAATTGCAGCCTTGAAGGCACCATTGATTGCGCATGCAAGCCAGCCAGATATACAATCTAAACTTCCGAGGGCTGTGCTGGTTGTTCTGGGACTTGCTTCCGATTCTCAGTTGATGGCTTTGGAAAATGCCCAAGTTTCAACTTCCTCTAGGGATGGAATGCCTGATGAAGAAATTATTTTTTCTATGATGAAGTTCCCATGA 4086 0.4258 MVGKTMSMAATSREKLASLVNAAKLAIDIPSKLESLRQLRHELPPEDPVLLTEFLPSLFLFHSDRFGPVRKFLTEMLGEIGLKNTEFLSNIVPVLIDLLDDDTPAVVRQVLLCGTDLFRATLEKIVVQGLYSSDLDGALESAWAWMLKFKDKVYSIAFQHGSGGAKLLALKFVEAVIRLYTPDPNGSSEPTSHQGRPVEFNILWLRRGHPVLNIGDLKIEASHRLGLLLDQLRFPTVKSLSNSVIIVLIKSLSAIAFDRPAFYGRILPVLLSLEPSSSVVNGVCVSATHFALKNAFVTCSKCTHPSAAPWRDRLAEALKEMQSEGKADRVFHLISASNGTIEREKDDQPVIKEEEPATNSGDSVQNNLARKRSGSQIGGDLAEDEETPGKRVRTTVVALEEPKELDECTTTYSQDETPTVPTSSKGDVDNGPVRQLVATFGALIAQGERAVGHLEILISSISADLLAEVVMANMQNLPLNYPNAEGNDEQLQDISMIGSDDKAKYPPSFVAAVMSLSSTFPPIASLLDAHQSVSNEVVKSQVEEEISATAANSGAVDSGMNIESENIPSPIDFPSSDASIPGVENGCTTMPPDIHDVGNSESGIPGLDSFGRSDSVSQTSAPSLLVSTEICLEDGSQEQDTSLDQRSPLNVAPSISTDRSEELSPKAAVRDVNSLVSSTATSVVPPRLVLPKMIAPVVDLEDEQKDHLQKSCFMRIIDAYKQIAVAGGTNIRFSILAYLGVEFPLELDPWKLLQKHILIDYISHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYENFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDKGEKELHSLNADRVTQGLSTVWSLILLRPPIRDTCLQIALQSAVHHLEEVRMKAIRLVANKLYPLSSISKQIEDFAKEMLFSVMSGDASEATDIECSIADSEKGPDVEKVPNEQSSLSGSTKDVTSDNRQSCTSESVSPDSVSEAQRCMSLYFALCTKKHSLFRQIFVIYRSTSKAVKQAVHRQIPILVRTMGSSSDLLEIISDPPNGSENLLMQVLQTLTDGTIPSKDLICTVKRLHDSKLKDAEFLIPILPFLSNDEVMPIFSHIVNLPLEKFQAALGRILQGSSQSGPVLTPAEVLIAIHGIDPEKDGIALKKVTDACNACFEQRQTFTQEVLARVLNQLVEQIPPPLLFMRTVLQAIGAFPTLVDFIMGILSRLVTKQVNILLLSVFVIYSILECTCISNELLQIWKYPKLWVGFLKCVQLTKPQSFGILLQLPPAQLENALNRIAALKAPLIAHASQPDIQSKLPRAVLVVLGLASDSQLMALENAQVSTSSRDGMPDEEIIFSMMKFP 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00459 1361 Pfam Symplekin tight junction protein C terminal 1091 1295 IPR022075 -
Gma03g00459 1361 Pfam Symplekin/PTA1 N-terminal 104 323 IPR032460 -
Gma03g00459 1361 MobiDBLite consensus disorder prediction 635 661 - -
Gma03g00459 1361 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1268 - -
Gma03g00459 1361 MobiDBLite consensus disorder prediction 635 666 - -
Gma03g00459 1361 MobiDBLite consensus disorder prediction 341 394 - -
Gma03g00459 1361 SUPERFAMILY ARM repeat 34 1243 IPR016024 -
Gma03g00459 1361 MobiDBLite consensus disorder prediction 411 428 - -
Gma03g00459 1361 MobiDBLite consensus disorder prediction 958 986 - -
Gma03g00459 1361 MobiDBLite consensus disorder prediction 949 986 - -
Gma03g00459 1361 MobiDBLite consensus disorder prediction 406 428 - -
Gma03g00459 1361 Gene3D - 2 347 IPR011989 -
Gma03g00459 1361 PANTHER SYMPLEKIN/PTA1-RELATED 1 1268 - -
Gma03g00459 1361 MobiDBLite consensus disorder prediction 377 394 - -
Gma03g00459 1361 MobiDBLite consensus disorder prediction 358 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00459 Gma-Chr3 8202990 8224908 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00459 K06100 - gmx:100779360 2499.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00459 03 8202990 8224908 Gma03g00459 03 8202990 8224908 ECH