Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00450 ATGACGGCATGCCAAGATTGGCCAGAGCCAGTGATTCGAGTCCAAGCCTTGGCTGCAAGTGGCTTAGCCACAATCCCCGAACGTTTCATAAAGCCTAAGTCCCAAAGACCCACTAATAGTAACAATTATGCTCCAAAGACCAATTCCTCTCAAATTGGTCATCATAAGAACAATACCACCAACAGCAACATCCCAGTGATTGACATGAAGCACATCTACGGTGGTGACGAGGGAAAGAGGGCTGAGACGCTCCGGCTCGTGTCGGAGGCGTGCCAAGAATGGGGTTTTTTCCAGGTGGTGAACCATGGAGTGAGCCATGAGTTGATGAAGGGGGCAAGGGAGGTGTGGAGGGAGTTCTTTCACCAGCCACTTGATGTGAAAGAGGTGTATGCTAATACACCCCTCACTTATGAAGGGTATGGAAGCAGGTTGGGAGTGAAAAAAGGGGCCATTTTGGATTGGAGTGATTACTTCTTTCTCCATTACATGCCTTGTTCCCTAAGGGACCAAGCCAAGTGGCCTGCCCTCCCAACATCCTTAAGGAGCATCATCTCTGAATATGGTGAACAAATTGTTAAGCTAGGAGGAAGGATACTTGAGATAATGTCAATAAATCTTGGCCTTAGAGAGGATTTTCTCCTAAATGCATTTGGTGGGGAAAATGACCTTGGTGCTTGCTTGAGGGTGAATTTCTACCCTAAGTGCCCACAGCCTGACCTCACTCTTGGACTTTCCTCTCACTCAGATCCTGGTGGCATGACCATTCTTCTCCCTGATGAAAATGTGGCAGGACTTCAAGTACGCAGAGGAGAAGATTGGGTCACTGTTAAGCCAGTCCCAAATGCTTTCATCATCAACATGGGTGACCAAATTCAGGTGCTGAGCAATGCAACTTACAAGAGTATAGAGCACAGGGTGATCGTGAACTCAGACAAAGATCGTGTTTCATTGGCCTTTTTCTATAACCCCAGGAGCGATATACCGATCCAACCAGCCAAGGAGCTTGTGACTAAGGATAGGCCAGCACTATACCCACCAATGACATTTGATGAGTATAGACTTTACATTAGGACAAGAGGACCAAGTGGAAAAGCTCAAGTTGAATCTTTGACTTCCAAATGA 1122 0.4679 MTACQDWPEPVIRVQALAASGLATIPERFIKPKSQRPTNSNNYAPKTNSSQIGHHKNNTTNSNIPVIDMKHIYGGDEGKRAETLRLVSEACQEWGFFQVVNHGVSHELMKGAREVWREFFHQPLDVKEVYANTPLTYEGYGSRLGVKKGAILDWSDYFFLHYMPCSLRDQAKWPALPTSLRSIISEYGEQIVKLGGRILEIMSINLGLREDFLLNAFGGENDLGACLRVNFYPKCPQPDLTLGLSSHSDPGGMTILLPDENVAGLQVRRGEDWVTVKPVPNAFIINMGDQIQVLSNATYKSIEHRVIVNSDKDRVSLAFFYNPRSDIPIQPAKELVTKDRPALYPPMTFDEYRLYIRTRGPSGKAQVESLTSK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00450 373 Gene3D - 9 358 IPR027443 -
Gma03g00450 373 Pfam 2OG-Fe(II) oxygenase superfamily 225 323 IPR044861 -
Gma03g00450 373 SUPERFAMILY Clavaminate synthase-like 10 358 - -
Gma03g00450 373 MobiDBLite consensus disorder prediction 33 63 - -
Gma03g00450 373 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE 3 368 - -
Gma03g00450 373 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 368 - -
Gma03g00450 373 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 323 IPR005123 -
Gma03g00450 373 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 174 IPR026992 -
Gma03g00450 373 MobiDBLite consensus disorder prediction 28 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00450 Gma-Chr3 8010321 8014179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00450 14 370 Glycosyltransferase AT5G59530 30.685 1.87e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00450 - - gmx:100809662 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00450 03 8010321 8014179 Gma03g00450 03 8010321 8014179 ECH