Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00092 atgtcAGCTATCTGTGGGCTTCCTATCCTTGAGTGTGTTTATTGTCTGGCCTGTGCTCGTTGGGTTTGGAAGAAGTGTTTGTACACTGCAGGCTATGAGAGTGAAAATTGGGGCCTGGCTACTGCACAAGAATTTGAGCCTGTGCCTCGGATCTGTCGGCTAATCTTAGCCGTCTACGAAGATGATATTCGTAACCCTCAATGGGCTCCCCAAGGAGGTTATGGCATTAATCCAGATTGGGTTATCTTGCGTAAAGACTACAACGATAACCAAGGTCGCGTTACTCCATACATGATATACCTTGATCATGATCATGCTGAAATCATACTGGCTGTTAGTGGACTCAATTTGGGGAAGGAAAGTGATTATATGGTTTTGCTTGATAACAAGCTGGGACAGGCGGAATTTCACGGTGGTTATGTTCATAACGGGTTGTTGAAGGCAGCGGGATGGGTTTTTGATGCAGAATATGAGGTTCTCAGGGAGCTAGCTGCAGAAAATCCAACTTATATGTTAATATTTACTGGGCATTCTCTAGGGGCTGGGGTGGTGGCATTGTTGACAATGCTAGCAGTCCATAATCGAGACAAATTGGGGATATCGAGAAACAAGATAAGGTGCTTTGCGATAGCTTCTCCTCGGTGTGCGTCTCTCAACTTGGCTGTAAGATATGCAGATGTGATCAATTCTGTTGTACTACAGGATGATTTTTTACCTCGAACAACTGCTGCTCTAGAAGACGTCTTCAAATCACTTTTATGTTGGCCCTGTTTATTGTGTATAATGTGCTTAAAGGATACTTGCACACTGGAGGAGAAGAAGCTTAGAGATCCAAGGCGACTGTATGCACCTGGTCGGCTCTATCACATTGTGGAACGAAAGCCCTTTAGGATAGGAAGGCTTCCACCTGTCGTTAGAACAGCAGTACCTGTTGATGGGAGGTTTGAGCATTTAGTTCTTTCTTGCAATGCAACTTCTGACCATGCCATCATTTGGATAGAGAGAGAATCCCGACGGGCTCTCGATATAATGCGAGATAACGATGAGCATATGGAGATTCCAGCAGAGCAAAGGATGGAGAGGCATGAATCTATCGCTCGAGAACACAGTGAAGAGTACCATGCAGCCCTTCAGAGAGCAGTTGCTTTGGATATTCCTCAAGCATACTCACCTTCATCATATGGAACATTTCATCAAATTGATGTTGGGGAGGATTCTGGAAGATCAAGTGCCCTTGGTTCCTCCTTGTTTCACAAGAAACGAACACAAAGTTGGAATGAATTTATTGGACGCCTGTTTGATGTGGATGACGCTGGTCATATGGTGTTCAAAAAGACATCTCCATGA 1347 0.4439 MSAICGLPILECVYCLACARWVWKKCLYTAGYESENWGLATAQEFEPVPRICRLILAVYEDDIRNPQWAPQGGYGINPDWVILRKDYNDNQGRVTPYMIYLDHDHAEIILAVSGLNLGKESDYMVLLDNKLGQAEFHGGYVHNGLLKAAGWVFDAEYEVLRELAAENPTYMLIFTGHSLGAGVVALLTMLAVHNRDKLGISRNKIRCFAIASPRCASLNLAVRYADVINSVVLQDDFLPRTTAALEDVFKSLLCWPCLLCIMCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKPFRIGRLPPVVRTAVPVDGRFEHLVLSCNATSDHAIIWIERESRRALDIMRDNDEHMEIPAEQRMERHESIAREHSEEYHAALQRAVALDIPQAYSPSSYGTFHQIDVGEDSGRSSALGSSLFHKKRTQSWNEFIGRLFDVDDAGHMVFKKTSP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00092 448 Pfam Lipase (class 3) 119 242 IPR002921 GO:0006629
Gma03g00092 448 CDD Lipase_3 44 240 - -
Gma03g00092 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Gma03g00092 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Gma03g00092 448 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
Gma03g00092 448 SUPERFAMILY alpha/beta-Hydrolases 44 251 IPR029058 -
Gma03g00092 448 Gene3D alpha/beta hydrolase 39 250 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00092 Gma-Chr3 1065035 1069203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00092 1 446 Miscellaneous Gene Families AT3G49050 61.311 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00092 - - gmx:100800227 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00092 03 1065035 1069203 Gma03g00092 03 1065035 1069203 ECH
Gma07g00652 07 6739058 6743634 Gma03g00092 03 1065035 1069203 ECH