Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00010 ATGCGACCAACACCCACCCCAGATAACCTCTATTGCATTCCCAGGCTGATAAGAAGGAACAAGCAGAATGAAGCGTTGACAGTGTTCAAAGCCAAGCATCCTGTTACCACAGTGGACTCAACGAAGCTAGAGGACTTTCACGTGAGCTTGGATCCAGTAAAACTAAGGGTAGATTTGAATGTGACCCTGGGAGTGGATGTCTCAGTGAAGAACCCGAACAAGGTGGGATTCCAGTATTCAGACAGCACTGCCCACCTCAATTACAGAGGGCAGCTGATAGGTGAAGTCCCGATCTCTGCCGGAGAGATTTCATCCGGTGAGACCAAAGGATTCAATCTCACCCTCACCATTATGGCCGACCGTTTGCTCTCCAATTCTCAGCTTTTATCTGATGTCACATCTGGTACATTGCCCCTAAACACTTTCGTGAGGATGTCTGGGAAAGTCAGCATCTTAGGCTTTATCAAAGTCCATGTGGTTTCCTCCACTTCTTGTGATGTTGCAATTAATCTTTCTAATGGAACTGTTGGGAACCAAGAGTGCCAGTACAAGACAAAACTTTGA 564 0.4663 MRPTPTPDNLYCIPRLIRRNKQNEALTVFKAKHPVTTVDSTKLEDFHVSLDPVKLRVDLNVTLGVDVSVKNPNKVGFQYSDSTAHLNYRGQLIGEVPISAGEISSGETKGFNLTLTIMADRLLSNSQLLSDVTSGTLPLNTFVRMSGKVSILGFIKVHVVSSTSCDVAINLSNGTVGNQECQYKTKL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00010 187 Pfam Late embryogenesis abundant protein 67 164 IPR004864 -
Gma03g00010 187 Gene3D - 15 169 - -
Gma03g00010 187 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 25 186 - -
Gma03g00010 187 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 25 186 - -
Gma03g00010 187 SUPERFAMILY LEA14-like 59 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00010 Gma-Chr3 203072 204004 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00010 - - gmx:100811806 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00010 03 203072 204004 Gma03g00010 03 203072 204004 ECH
Gma18g02025 18 53555096 53555686 Gma03g00010 03 203072 204004 PCT
Gma09g02475 09 50096299 50096763 Gma03g00010 03 203072 204004 PCT
Gma03g00010 03 203072 204004 Gma18g02025 18 53555096 53555686 PCT
Gma03g00010 03 203072 204004 Gma09g02475 09 50096299 50096763 PCT