Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02884 ATGAACAACCTCTTCTTTCTCTTCTTCTTCCTCTTCTTAGCCTCCGCCGCCGCCAGCGTCCCCGCCCACAACATCACCCGCATGCTTGCCAAACACCCCGGCTTCTCCACCTTCAACCACTACCTCTCCCTCACCCACCTCGCCGAAGAGATCAACCGCCGCCAGACCATCACCGTCCTGGCCCTCGACAATGCCGCCATGTCCTCCCTCCTCGACAAGCACCTCTCCCTCCCCACCATCAAAAACGTCCTCTCCCTCCACGTCCTCGTCGACTACTTCGGCGCCAAAAAGCTCCACCAGATCAACAACAGCACCACCCTCGTCTCCTCCATGTTCCAGGCCACCGGCTCAGCCTCCGGCACCGCCGGCTACGTCAACATCACCAACCTCAAGGCCGGCAAGGTCGGCTTCGCCGCCGAAGACAACGACGGCTCCCTCCACTCCTTCTACGTCAAATCCGTCCAGGAAATGCCCTACTACATCTCCGTCCTCCAAATCAGCGCCGCCATAAGCTCCGCCGACGCCGAGGCCCCCACCGCCGCACCCTCCGCCATCGACCTGATCTCCATTATGTCCAAACAAGGCTGCAAGGCATTCGCGGACCTTTTAAGAGGCTCCAAAGCGCTTCCGGCTTTCAAGGAAAACGTTGACGGGGGCTTAACGGTTTTCTGCCCCACCGACAGCGCCATCAGCGGTTTCGCGCCAAAGTACAagaacctcacagaagctcagaaggtttcgcttctgttgtaccacgcgactcccgtataCGAGTCCCTGCAGATGCTGAAATCGAGCAACGGAATCATGAACACTCTGGCCACAGAGGGAGCGAACAAGTACGACTTCACAGTGAAGAGTGAAGGGGAAGACGTGAGTCTGAAGACTAAAGTCAACACCGCAAGCATAGTAGGGACATTGATAGATCAAGATCCATTCGTGGCATATAAGATAAACAGGGTGTTGATGCCGAGAGAGTTGTTCAAGGCCAGCGACGCCCTAGACCAAGCACCTGCGGAATCCCCTAAGCCTGCCAAGAGGAAGAAGAATGCTAAGAAGGGAAGCGCAGATTCCGATGCGGCGGATGCACCGGCGGACGGACCATCCGACGACTCGGAAGATCAGAAGGCTGCCGATCAGGACAGCAATGGAGTCAGCGGATTGCACGTGAGATTGGTCATGGTCTTGTTCGGTTTAATTATGGGTTTTTTGGTTCTATGA 1221 0.5397 MNNLFFLFFFLFLASAAASVPAHNITRMLAKHPGFSTFNHYLSLTHLAEEINRRQTITVLALDNAAMSSLLDKHLSLPTIKNVLSLHVLVDYFGAKKLHQINNSTTLVSSMFQATGSASGTAGYVNITNLKAGKVGFAAEDNDGSLHSFYVKSVQEMPYYISVLQISAAISSADAEAPTAAPSAIDLISIMSKQGCKAFADLLRGSKALPAFKENVDGGLTVFCPTDSAISGFAPKYKNLTEAQKVSLLLYHATPVYESLQMLKSSNGIMNTLATEGANKYDFTVKSEGEDVSLKTKVNTASIVGTLIDQDPFVAYKINRVLMPRELFKASDALDQAPAESPKPAKRKKNAKKGSADSDAADAPADGPSDDSEDQKAADQDSNGVSGLHVRLVMVLFGLIMGFLVL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02884 406 ProSiteProfiles FAS1/BIgH3 domain profile. 183 322 IPR000782 -
Gma02g02884 406 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 400 IPR033254 -
Gma02g02884 406 SUPERFAMILY FAS1 domain 29 141 IPR036378 -
Gma02g02884 406 Gene3D FAS1 domain 163 325 IPR036378 -
Gma02g02884 406 Gene3D FAS1 domain 22 147 IPR036378 -
Gma02g02884 406 SUPERFAMILY FAS1 domain 181 325 IPR036378 -
Gma02g02884 406 MobiDBLite consensus disorder prediction 341 356 - -
Gma02g02884 406 Pfam Fasciclin domain 196 324 IPR000782 -
Gma02g02884 406 Pfam Fasciclin domain 34 113 IPR000782 -
Gma02g02884 406 ProSiteProfiles FAS1/BIgH3 domain profile. 22 189 IPR000782 -
Gma02g02884 406 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 3 400 - -
Gma02g02884 406 SMART fasc_3 221 325 IPR000782 -
Gma02g02884 406 MobiDBLite consensus disorder prediction 333 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02884 Gma-Chr2 54239653 54241160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02884 - - gmx:100805178 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00043 14 374993 376624 Gma02g02884 02 54239653 54241160 GST