Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02829 ATGGCTTCGGAGACTGAGACGTTTGCTTTTCAGGCCGAGATCAACCAGCTCCTCAGTCTAATCATCAACACCTTCTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCATCAGCAATGCCTCTGATGCTTTGGACAAGATTCGATTTGAGAGTCTTACAGACAAGAGCAAGCTTGATGCTCAGCCAGAGTTGTTCATTCACATTATTCCTGACAAGACCAACAACACATTGTCTATCATTGACAGTGGTATTGGCATGACTAAGGCCGATTTGGTGAATAACCTCGGTACTATTGCAAGGTCTGGGACCAAGGAATTCATGGAAGCCCTGGCTGCTGGTGCTGATGTGAGCATGATTGGACAGTTTGGTGTTGGTTTCTACTCGGCTTATCTTGTAGCTGACAAGGTTATTGTTACCACAAAGCACAATGATGATGAGCAGTATGTCTGGGAGTCCCATGCTGGTGGCTCATTTACTGTGACAAGGGATACATCTGGTGAGAACCTTGGTAGGGGAACAAAGATAACTTTGTTTCTCAAGGAAGATCAACTTGAGTATCTTGAGGAACGCCGTCTGAAGGATTTGATAAAGAAGCATTCTGAATTCATTAGCTATCCAATTTCTCTTTGGATTGAGAAGACCACTGAAAAGGAGATTTCTGATGATGAGGACGAGGAAGAGAAGAAGGATGAGGAGGGTAaagttgaagatgtggatgaagataaggagaaggaggagaagaaaaagaagaccattaaggaggtatctcatgagtggtcattggtgaacaagcagaagcctatttggatgaggaaacctgaagagatcacaaaagaagaatatgctgctttctacaagagtcttaccaatgattgggaagagcatttggctgttaagcacttttctgttgagggtcagctggagtttaaggctgtcctctttatccccaagagggcaccttttgatctttttgacactaagaagaagcctaacaacatcaaactgtatgtCCGCCGTGTTTTCATCATGGACAACTGTGAGGAGTTGATGCCAGAATATCTTAGctttgttaagggtattgtggattctgaggatcttcctctcaacatttctagagaaatgctgcagcagaacaagatcctgaaagtcatcaggaagaacttggtcaagaagtgcattgagatgttctttgaaattgctgagaacaaggaagactataacaagttttatgaagccttctctaagaatctgaaacttggtattcatgaggattctcagaacaagacaaaacttgctgaattgctcaggtatcactccaccaagagtggtgatgagatgaccagcctcaaggactatgttaccaggatgaaggaagggcagaatgacatctactacattactggtgaaagcaagaaagctgttgagaattcccctttccttgaaaagcttaagaagaaggggttcgaggttctctacatggttgatgctattgacgagtatgctgttggtcagcttaaggaatttgagggaaagaagttggtctctgctactaaggaaggcctgaaacttgacgagagcgaagacgaaaagaaaaagaaggaagaattgaaggagaaatttgagggtctctgccatgtgatcaaggatgtgttgggtgacaaggtggagaaagttgtggtgtctgatcgtgttgtggattctccttgctgtctcgtgactggtgaatatgggtggacagccaacatggaaaggattatgaaagcacaggcattgagggacagcagcatggctggatacatgtcgagcaagaagaccatggagattaaccctgagaaccccatcatggatgaactgaggaagcgagctgatgctgacaagaatgacaaatctgtgaaggatctcgttctcctactctttgagactgctcttctaacttctgggttcagccttgatgatcccaacactttcggtaacaggattcacaggatgctgaagcttggactgagcattgatgaagatgCTGGTGAAGCAGATGCTGACATGCCTCCTCTCGAGGACGCCGATGCTGATGCCGATGCTGAGGGTAGCAAGATGGAAGAAGTTGATTAA 2109 0.1811 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVADKVIVTTKHNDDEQYVWESHAGGSFTVTRDTSGENLGRGTKITLFLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDEDKEKEEKKKKTIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFIPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEELMPEYLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCIEMFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNKTKLAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGFEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKKEELKEKFEGLCHVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGEADADMPPLEDADADADAEGSKMEEVD 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02829 702 CDD HATPase_Hsp90-like 15 203 - -
Gma02g02829 702 Pfam Hsp90 protein 185 688 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma02g02829 702 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 2 700 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma02g02829 702 SUPERFAMILY HSP90 C-terminal domain 543 664 IPR037196 -
Gma02g02829 702 Gene3D - 263 431 - -
Gma02g02829 702 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5 214 IPR036890 -
Gma02g02829 702 PANTHER HEAT SHOCK PROTEIN 81-2 2 700 - -
Gma02g02829 702 MobiDBLite consensus disorder prediction 218 239 - -
Gma02g02829 702 MobiDBLite consensus disorder prediction 674 689 - -
Gma02g02829 702 Gene3D - 519 668 IPR037196 -
Gma02g02829 702 PIRSF HSP90_HTPG 1 702 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma02g02829 702 Hamap Chaperone protein HtpG [htpG]. 3 665 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma02g02829 702 Gene3D - 3 229 IPR036890 -
Gma02g02829 702 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 182 IPR003594 -
Gma02g02829 702 Gene3D - 432 518 - -
Gma02g02829 702 SUPERFAMILY Ribosomal protein S5 domain 2-like 264 519 IPR020568 -
Gma02g02829 702 PRINTS 90kDa heat shock protein signature 6 26 IPR020575 -
Gma02g02829 702 PRINTS 90kDa heat shock protein signature 27 49 IPR020575 -
Gma02g02829 702 PRINTS 90kDa heat shock protein signature 76 93 IPR020575 -
Gma02g02829 702 PRINTS 90kDa heat shock protein signature 94 111 IPR020575 -
Gma02g02829 702 PRINTS 90kDa heat shock protein signature 119 141 IPR020575 -
Gma02g02829 702 PRINTS 90kDa heat shock protein signature 171 188 IPR020575 -
Gma02g02829 702 PRINTS 90kDa heat shock protein signature 189 207 IPR020575 -
Gma02g02829 702 SMART HKATPase_4 28 183 IPR003594 -
Gma02g02829 702 MobiDBLite consensus disorder prediction 674 702 - -
Gma02g02829 702 Coils Coil 523 543 - -
Gma02g02829 702 ProSitePatterns Heat shock hsp90 proteins family signature. 26 35 IPR019805 GO:0005524|GO:0006457|GO:0051082
Gma02g02829 702 Coils Coil 228 255 - -
Gma02g02829 702 MobiDBLite consensus disorder prediction 216 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02829 Gma-Chr2 53784576 53787650 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02829 K04079 - gmx:100194422 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02829 02 53784576 53787650 Gma02g02829 02 53784576 53787650 ECH