Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02812 ATGTCAATCTCAGCAAGTTCAGGGGATTTTGAGATTCTCCCTGCCACAGATGATGCCCATGGAGGAGTCATTATAGATTTGAAGGAGCCAATGGACTCTGAAATTTTTGTTACTttgcttagaacgtcgctctcacaatggaagaaacagGAGAAATGCGGTGTTTGGATCAAGTTACCTACAGCACTAGTTAATCTTGTTGAAACTGCAGTTAAGGAGGGTTTCGGTTACCACCATGCTGAACCAAACTATCTAATGCTAGTTTATTGGATTATTCCTGAAACAAGCTGCACAATCCCTCCAAATGCATCCCACCGTGTAAGGGTCGGTGGTCTTGTCTTAAATGATAACAAAGAGGTGCTTGTAGTCCAGGAAAAAAGAGGTATATTCCATGAAACTGGCCTTTGGAAGATACCTACCGGAATAGTTGAAGCGGGTGAGGAGCTTTCAGCCGCAGTTGTTAGAGAAGCAAAAGAAGAGACAGGAATTGATACAGAATTTGTGGAATTACTGGCATTCAGGCACGCACATAATTCATTCTTTGGGAAATCAGAACTATATTTCCTTTGCATGTTGCGTCCTCTTTCTACTGACATCAAAAAGCAAGATTTGGAAATTGATGCTGCCAAGTGGATGCCGTTTGAGGAATATGCTGCCCGTCCTATTACAGAACCCTTCAAGTATGAAATTGAGTTATGCTTAGCAAAGTTAGAAAGGAGCTATGCTGGATTCTCTCCACGACCTATCTCATCATATTACAAGGAGGAATTGAGTTATCTATATTTAAATAGCCATGACTTGGACAAATCTTCGAAATCATTCGAGGCACAGGCTCTTATGACTGTAGTTGATGTGATCCCAACCCCAACTTCTTGTGAGAACTGTCAGGTCACTCCACCACTTCCTGGTTATCCTTCTTATGGAGCTCCGCCACCACCTTCTGGCTACTCTATATATGGTGCTCCACCACCACCACACAAGGCAGGCCAATCTAAGTGCCCTCCTGCTGCAGGTGTTCAGTGTTGTACCCCTCCTGCACCTTACACTTATGGTTATGGACCTCCAAATACTTATTATGCGCCTCCTAATCCTTACACCTATGTGCCTTATGGGAAAGGACAAGGCCCTGCTTCTATGGTTCTGCCAATTCTAGTCCCCCTCATCATGCTTTTCTCTTCCTTTATTTTTCTAGTCTGA 1197 0.4211 MSISASSGDFEILPATDDAHGGVIIDLKEPMDSEIFVTLLRTSLSQWKKQEKCGVWIKLPTALVNLVETAVKEGFGYHHAEPNYLMLVYWIIPETSCTIPPNASHRVRVGGLVLNDNKEVLVVQEKRGIFHETGLWKIPTGIVEAGEELSAAVVREAKEETGIDTEFVELLAFRHAHNSFFGKSELYFLCMLRPLSTDIKKQDLEIDAAKWMPFEEYAARPITEPFKYEIELCLAKLERSYAGFSPRPISSYYKEELSYLYLNSHDLDKSSKSFEAQALMTVVDVIPTPTSCENCQVTPPLPGYPSYGAPPPPSGYSIYGAPPPPHKAGQSKCPPAAGVQCCTPPAPYTYGYGPPNTYYAPPNPYTYVPYGKGQGPASMVLPILVPLIMLFSSFIFLV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02812 398 CDD Nudix_Hydrolase_12 105 226 - -
Gma02g02812 398 Gene3D - 11 96 - -
Gma02g02812 398 Pfam Nudix hydrolase domain 13 91 IPR040618 -
Gma02g02812 398 ProSiteProfiles Nudix hydrolase domain profile. 104 234 IPR000086 -
Gma02g02812 398 PANTHER NUDIX HYDROLASE RELATED 7 273 IPR003293 -
Gma02g02812 398 SUPERFAMILY Nudix 71 230 IPR015797 -
Gma02g02812 398 PRINTS NUDIX hydrolase family signature 136 150 IPR020476 -
Gma02g02812 398 PRINTS NUDIX hydrolase family signature 150 165 IPR020476 -
Gma02g02812 398 PANTHER NUDIX FAMILY HYDROLASE 7 273 - -
Gma02g02812 398 ProSitePatterns Nudix box signature. 141 162 IPR020084 GO:0016787
Gma02g02812 398 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 106 242 - -
Gma02g02812 398 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 63 81 IPR003293 -
Gma02g02812 398 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 190 214 IPR003293 -
Gma02g02812 398 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 102 120 IPR003293 -
Gma02g02812 398 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 162 185 IPR003293 -
Gma02g02812 398 Pfam NUDIX domain 105 223 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02812 Gma-Chr2 53669582 53674673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02812 - - gmx:100815518 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02812 02 53669582 53674673 Gma02g02812 02 53669582 53674673 ECH
Gma14g00125 14 1045878 1046647 Gma02g02812 02 53669582 53674673 GST