Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02807 ATGATTAAGAAGGAAGAAGAACAACAAATCAAGCAAGAAGGTGGACGCCATAGGCAACACTCCTTTGATGATTCGGATCAACAGCCTCTCCGCCGTTGCCAAATTCTCGGCAAGTGCGAGTTCTTAAACCCCGGAGGCAGCGTCAATGACCGTGTTGCTGTTCATATTATTCAAGAGGCTCTGGAATCTGACCAGCTACGTCCAGATGGAATTGTCACTGAAGGGAGTGCTGGAAGCACTGCCATTAGCATTGCCACTATTGCTCCTGCGTATGGATGCAGGACCCACGTGGTTATTCCGGATGATGCTGCCATTGAGAAATCTCAAATACTTGAAGCCCTTGGGGCAACTGTTGAAAGAGTGAGACCGGTGTCCATTACCCACAAAGACCATTTTTTTGCATTGAAGCGTACAAATTCACAACAATTGAATGGCAAGGAGGACACCGAGAAAATAAATGGTTATGAATCTGATGGATGCAGTTACAGCTCTCTGTTTCCTGAAGATTGCCAAGGTGGCTTTTTTGCTGATCAGTTTGAGAACCTAGCGAACTTCAGGGCCCATTATGAGGGTACAGGGCCTGAGATTTGCAGCAGGCACTGGTGGTACTGTGGCTGGTGTTTCAAAGTTTCTTCAGGTTCACCACAACCCCCCTTCCTCCACGTTGTAGATGTTGTCGTTTTGAGTGTTAAAGTTGAAAAGAATCCAAACATCAAGTGCTTCCTCGTAGATCCTCCTGGCTCTGGTTTGTTTAATAGGGTAACTAGGGCGGTGATGTACACCAAAGAGGAGGCAGATGGAAGAAGACTTAAGAATCCATTTGACACTATAACGGAAGGAATTGGAATTAACAGGATAACAAGGAATTTTGCAATGGCAAAACTTGATGGGGCCTTTAGAGGCACCGATAGGGAGGCTGTTGAAATGTCTAGGTTGTTTCTTTTGAAGAACGATGGTCTCTTCCTTGGGAGTTCTTCTGCAATGAACTGTGTTGGAGCAGTAAGAGTAGCGCAAGCAATTGGCCCTGGTCACACAATTGTAACCATTCTCTGCGACAGTGGAATGAGACATTTGAGCAAATTCTATGATGCTGAATACTTGTCTCTGCTTGGTTTGACACCGAAAGCAACTGGTTTGGAGCTCTTAGGCATCAAATGA 1158 0.4551 MIKKEEEQQIKQEGGRHRQHSFDDSDQQPLRRCQILGKCEFLNPGGSVNDRVAVHIIQEALESDQLRPDGIVTEGSAGSTAISIATIAPAYGCRTHVVIPDDAAIEKSQILEALGATVERVRPVSITHKDHFFALKRTNSQQLNGKEDTEKINGYESDGCSYSSLFPEDCQGGFFADQFENLANFRAHYEGTGPEICSRHWWYCGWCFKVSSGSPQPPFLHVVDVVVLSVKVEKNPNIKCFLVDPPGSGLFNRVTRAVMYTKEEADGRRLKNPFDTITEGIGINRITRNFAMAKLDGAFRGTDREAVEMSRLFLLKNDGLFLGSSSAMNCVGAVRVAQAIGPGHTIVTILCDSGMRHLSKFYDAEYLSLLGLTPKATGLELLGIK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02807 385 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 32 367 IPR036052 -
Gma02g02807 385 Pfam Pyridoxal-phosphate dependent enzyme 33 352 IPR001926 -
Gma02g02807 385 PANTHER CYSTATHIONINE BETA-SYNTHASE 32 383 - -
Gma02g02807 385 PANTHER CYSTEINE SYNTHASE-RELATED 32 383 - -
Gma02g02807 385 CDD CBS_like 29 359 - -
Gma02g02807 385 MobiDBLite consensus disorder prediction 1 27 - -
Gma02g02807 385 Gene3D - 31 198 IPR036052 -
Gma02g02807 385 Gene3D - 46 185 IPR036052 -
Gma02g02807 385 MobiDBLite consensus disorder prediction 1 28 - -
Gma02g02807 385 Gene3D - 227 366 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02807 Gma-Chr2 53651130 53653780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02807 33 359 Miscellaneous Gene Families AT3G04940 27.485 3.74e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02807 K01738 - gmx:100799081 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02807 02 53651130 53653780 Gma02g02807 02 53651130 53653780 ECH
Gma14g00129 14 1060505 1062860 Gma02g02807 02 53651130 53653780 GST