Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02804 ATGGAGGGAAAGAGGACGAGGTTCCAGTCGGAGTCACAACCACAGAGCGTAATTCTACTCACGAAAATCAAAGAATTCACTCGAGCTTTGCTCGCAGACCTCACCAACGGACGCTCACCGCTCATTCTCATCGATCGCTTCAGAAGCTACTGCACCCTTTCCAACTCCAACTGGTTCGATTCTAATCCCAACCAATCACCGTTTCACCTCTTCGTTTCTAACACAAATGTTTCGCAATGCAGCTTTTGTGCCTCCGATTTGCCGTGCGGAAAGGAACTTCTCACGCTTCGCAGGAAATCCCACGCCCACAGACTAGCTGTCATGTTGAGAGTGATGCTGATAGTTCAGAAACTTTTGCAAGAGAACAAGCATAGTTCCAAGAGAGACATTTATTACACCTATCCTTCTGTATTTTTGGATCAGTCGGTGGTTGACCAAGCAATTAATGATATATGTATTCTTATGCAATGCAGTCGCCATAACCTTAATGTGGTAGTTTTTTGCACTATCGTTTTTTGCCAATTTTTTTTTGGTTTGGCTCTTGGTGAATTTTGGTTAATTATGGGCTGGATAAGATTTTCTGAAGGAGAAAGGATATTTGATTGCATAAGTTCTCCCAACACTGCCCACCCTGTTCCTGTTCATGTTGAAGAAGTTCAAGATATCATTAGTCTTGCTCAATACATATTAGTTGTGGAGAAAGAATCAGTTTTCCAAAGGCTAGCAAACGACCAATTCTGCAATGCAAATCACTGTATTGTCATCACTGTAAGCAATCTTCTGAAGACATTAGTTTCTTTTGCAACAATATTTCTTTGTTTGAATTCTATCTTTATTCAGGGAAGAGGTTACCCGGATATTCCTACAAGAAGCAGGTTTTTGCGTCTTCTGGTTGAGAATTTGTGCCTACCTGCTTATTGCTTGGTAGATTGTGATCCCTATGGCTTTGACATCTTAACCACTTACAGATTTGGTTCAATGCAAATGGCCTATGACACGAAACATCTTCGTGTCCCAGAGATACAATGGCTTGGAGCTTTTCCTTCTGATTCTGAGAGATATTTTGTTCCGAATCAGTGTCTCCTTCCATTGACTGCTGAAGACAAAAGAAAAGTTGAAGCCATGCTACTTAGATGCTACCTTGAAAGGGAGGTACCACAATGGAGGTTGGAGCTACAGTTGATTCTGCAAAGAGGAGTAAAGTTTGAGATTGAAGCCTTATCTGTGCACGCACTTTCATTCTTGTCAGAGTCTTACATACCATCTAAAATTGAAGGTAAATTGATAATGTAG 1293 0.4114 MEGKRTRFQSESQPQSVILLTKIKEFTRALLADLTNGRSPLILIDRFRSYCTLSNSNWFDSNPNQSPFHLFVSNTNVSQCSFCASDLPCGKELLTLRRKSHAHRLAVMLRVMLIVQKLLQENKHSSKRDIYYTYPSVFLDQSVVDQAINDICILMQCSRHNLNVVVFCTIVFCQFFFGLALGEFWLIMGWIRFSEGERIFDCISSPNTAHPVPVHVEEVQDIISLAQYILVVEKESVFQRLANDQFCNANHCIVITVSNLLKTLVSFATIFLCLNSIFIQGRGYPDIPTRSRFLRLLVENLCLPAYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIQWLGAFPSDSERYFVPNQCLLPLTAEDKRKVEAMLLRCYLEREVPQWRLELQLILQRGVKFEIEALSVHALSFLSESYIPSKIEGKLIM 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02804 430 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 12 256 IPR002815 GO:0003677|GO:0003918|GO:0005694
Gma02g02804 430 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 276 426 IPR002815 GO:0003677|GO:0003918|GO:0005694
Gma02g02804 430 Gene3D - 186 429 - -
Gma02g02804 430 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11-1 12 256 - -
Gma02g02804 430 PRINTS DNA topoisomerase VI subunit A family signature 127 138 IPR002815 GO:0003677|GO:0003918|GO:0005694
Gma02g02804 430 PRINTS DNA topoisomerase VI subunit A family signature 310 326 IPR002815 GO:0003677|GO:0003918|GO:0005694
Gma02g02804 430 PRINTS DNA topoisomerase VI subunit A family signature 277 298 IPR002815 GO:0003677|GO:0003918|GO:0005694
Gma02g02804 430 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11-1 276 426 - -
Gma02g02804 430 SUPERFAMILY DNA topoisomerase IV, alpha subunit 102 425 IPR036078 GO:0003677|GO:0005694
Gma02g02804 430 CDD TOPRIM_TopoIIB_SPO 228 414 IPR034136 -
Gma02g02804 430 Gene3D - 7 166 IPR036388 -
Gma02g02804 430 Pfam Type IIB DNA topoisomerase 104 164 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02804 Gma-Chr2 53638303 53641779 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02804 K10878 - gmx:100813920 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02804 02 53638303 53641779 Gma02g02804 02 53638303 53641779 ECH