Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02760 ATGCTCTGCAAACTGAGCATGGCTCCTCTCGCATTTTCCTTCTTCTTCATCCTTATCACATTCTTTTCTTCATCATCTGAAGCGGGATCCGTTGGAATAAACTATGGAAGGGTTGCGAACGACCTACCTACACCAGCGAAAGTGGTGGAGCTTCTGAAGGCACAAGGTCTGAACCGTGTGAAGCTCTACGACACCGACGCCACCGTCTTAACCGCGTTTGCAAACTCGGGAATCAAGGTCGTAGTTGCCATGCCAAACGAGCTTCTTGCCAACGCCGCCGCGGACCAGTCCTTCACCGATGCGTGGGTCCAAGCCAACATCTCCACCTACTACCCCGCCACGCAAATCGAAGCCATAGCCGTCGGAAACGAAGTCTTCGTCGACCCCAACAACACAACAAAGTTCCTCGTACCCGCCATGAAGAACGTCCACGCTTCTCTAACAAAGTACAACCTCGACAAAAACATTAAAATCTCCTCACCCATCGCACTCTCCGCGCTCCAGAACTCGTTCCCCGCCTCATCCGGTTCCTTCAAAACCGAACTCGTCGAACCGGTTATCAAACCCATGCTCGACCTGCTCCGCCAAACCGGTTCCTACTTAATGGTGAATGCGTATCCGTTTTTCGCTTACGCTGCAAACTCTGATAAAATCTCTTTAGACTACGCGCTATTCAAGGAAAACCCCGGCGTGGTTGATTCCGGTAATGGTTTAAAATACACGAACTTATTCGACGCTCAAATCGACGCCGTTTTCGCTGCCATGTCAGCACTCAAATACGACGACGTTAAGATCGCGGTTTCGGAAACGGGTTGGCCTTCTGCTGGGGACTCTAACGAGATTGGAGCCAGCCCCGACAATGCGGCGTCGTATAACGGAAACTTGGTTAAACGCGTGTTGAGTGGGAGTGGGACCCCCTTGAAGCAAAATGAGTCACTCGATGTTTTCCTCTTCGCGCTTTTCAATGAGAACCAGAAAACGGGTCCCACGTCGGAGAGAAACTACGGGCTGTTCTACCCCACTGAGAAGAAGGTTTACGATATTCCGCTCACGGCGGAGGAAATCAAGGAGGCGCCGCCGTCAGGAGTAGGGAAGAGCCAGGTTCCGGTGAGTGGTGAGGTGTCAACGACGACGTCTAAGGGCCAGACATGGTGCGTAGCTAGTGGCGGTTCTTCGGAGAAGAAGCTGCAGAACGCTCTTAACTACGCTTGCGGAGAGGGTGGGGCTGATTGCACTCCAATTCAACCAGGTGCCACGTGTTACAATCCTAACACCTTGGAGGCACATGCTTCCTACGCCTTCAACAGTTACTATCAGAAGAAGGCACGTGCATCCGGCACGTGCGATTTTGGTGGCACTGCTTATGTCGTCACTCAGCCCCCTAAGTATGGTAACTGCGAATTCCCCACAGGATACTGA 1419 0.5222 MLCKLSMAPLAFSFFFILITFFSSSSEAGSVGINYGRVANDLPTPAKVVELLKAQGLNRVKLYDTDATVLTAFANSGIKVVVAMPNELLANAAADQSFTDAWVQANISTYYPATQIEAIAVGNEVFVDPNNTTKFLVPAMKNVHASLTKYNLDKNIKISSPIALSALQNSFPASSGSFKTELVEPVIKPMLDLLRQTGSYLMVNAYPFFAYAANSDKISLDYALFKENPGVVDSGNGLKYTNLFDAQIDAVFAAMSALKYDDVKIAVSETGWPSAGDSNEIGASPDNAASYNGNLVKRVLSGSGTPLKQNESLDVFLFALFNENQKTGPTSERNYGLFYPTEKKVYDIPLTAEEIKEAPPSGVGKSQVPVSGEVSTTTSKGQTWCVASGGSSEKKLQNALNYACGEGGADCTPIQPGATCYNPNTLEAHASYAFNSYYQKKARASGTCDFGGTAYVVTQPPKYGNCEFPTGY 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02760 472 Pfam Glycosyl hydrolases family 17 31 348 IPR000490 GO:0004553|GO:0005975
Gma02g02760 472 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 12 465 - -
Gma02g02760 472 Gene3D - 377 468 - -
Gma02g02760 472 Pfam X8 domain 383 454 IPR012946 -
Gma02g02760 472 Gene3D Glycosidases 29 357 - -
Gma02g02760 472 SUPERFAMILY (Trans)glycosidases 31 348 IPR017853 -
Gma02g02760 472 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 12 465 IPR044965 GO:0004553|GO:0005975
Gma02g02760 472 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Gma02g02760 472 SMART X8_cls 383 468 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02760 Gma-Chr2 53231548 53234077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02760 26 461 Glycoside Hydrolase AT5G55180 72.706 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02760 - - gmx:100803406 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02760 02 53231548 53234077 Gma02g02760 02 53231548 53234077 ECH