Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02746 ATGTTTGGTGTCGTAAGGCGAAGGGTTGCTTCTGGCAGCCCGTCTCCTTGGTTGCTAGGTCAGTCAGCTCAGAAAATCCGGTCTGGCCCATCAGTTTCTGCTAGAGCTTCTTCCATTGTGGAAAAAGAGATTGTATTTCGTTCAGGCGGATGTGGATTTGTCCAGAACTTCAGTCATATAACTCCTGGTAATTTTCATTCTGATATTGCCCTATTGCTGCTCTGTAGGGTGGTCATTCATCCAGAGGCAACTGTTCGAACTTGGGGGCGTCTATTTTCTTCAGAAAGTGGAGACACGGTTGATGTTGTGGTTCCTCCTTTGGCTGAATCTATCTCTGATGGAACTCTGGCACAATTTTTGAAGAGGCCTGGTGACAGGGTTAATGCTGACGAGCCTATTGCTCAAATTGAAACAGATAAGGTGACAATTGATGTTTCAAGTCCTGAGTCAGGCGTGATTCTAAAGCTTCTAGCCAACGAAGGTGATACTGTTGAGCCAGGTAACAAGATAGCAATCATTTCAAGGTCTGCTGATGCAACTCACGTTGCCCCATCTGAGACTATATCTGAGAAAGCTGCTCCTCAGCCAACCCAAAAGGTTAGCGAGGAGAAGAAAGCCCCGAAAGTTGAAACTGCTCCTGCTAAAGAGAAGCCCAAAACACCTCCTGCCACTCTGAAGTCTCCCACTGAGCCCCAGCTTCCTCCTAAAGAAAGAGAAAGACGAGTTCCTATGACAAGGCTTCGGAAACGAGTTGCTACACGGCTGAAAGATTCCCAAAACACATTTGCTATGCTGACTACCTTCAATGAAGTTGATATGACTAATTTGATGAAGCTCCGTTCTGATTATAAGGATGCTTTTGTTGAAAAGCATGGAGTCAAATTGGGGCTTATGTCTGGCTTTGTCAAAGCTGCTGTCAATGCACTCCAACATCAGCCGATTGTCAATGCAGTCATTGATGGTGATGATATTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACTCCAAAGGGCCTTGTTGTACCGGTTATCCGCAATGCTGATACCATGAACTTTGCTGATATAGAAAAGCAGATTAATACTTTTGCAAAGAAGGCAAATGATGGATCTTTATCAATTGATGAGATGGCTGGAGGCACTCTTACAATATCCAATGGTGGTGTTTATGGAAGCCTTTTGAGTACCCCTATTATCAACCCTCCTCAGTCTGCAATCTTGGGTATGCATTCCATAGTGAGCCGTCCAACGGTTGTTGGAGGAAATATTGTCCCAAGACCAATGATGTACGTGGCTCTAACATATGACCACAGAATTATTGATGGAAGAGAGGCCGTGTTCTTTCTGCGACGCATCAAAGATATTGTGGAGGATCCTCGCAGGCTTCTGCTTGACATATGA 1407 0.4449 MFGVVRRRVASGSPSPWLLGQSAQKIRSGPSVSARASSIVEKEIVFRSGGCGFVQNFSHITPGNFHSDIALLLLCRVVIHPEATVRTWGRLFSSESGDTVDVVVPPLAESISDGTLAQFLKRPGDRVNADEPIAQIETDKVTIDVSSPESGVILKLLANEGDTVEPGNKIAIISRSADATHVAPSETISEKAAPQPTQKVSEEKKAPKVETAPAKEKPKTPPATLKSPTEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDAFVEKHGVKLGLMSGFVKAAVNALQHQPIVNAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADTMNFADIEKQINTFAKKANDGSLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPTVVGGNIVPRPMMYVALTYDHRIIDGREAVFFLRRIKDIVEDPRRLLLDI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02746 468 MobiDBLite consensus disorder prediction 180 247 - -
Gma02g02746 468 ProSiteProfiles Biotinyl/lipoyl domain profile. 99 174 IPR000089 -
Gma02g02746 468 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 124 153 IPR003016 -
Gma02g02746 468 MobiDBLite consensus disorder prediction 197 215 - -
Gma02g02746 468 MobiDBLite consensus disorder prediction 232 247 - -
Gma02g02746 468 CDD lipoyl_domain 100 173 - -
Gma02g02746 468 Gene3D - 98 176 - -
Gma02g02746 468 Gene3D - 224 464 IPR023213 -
Gma02g02746 468 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX 1, MITOCHONDRIAL-RELATED 1 468 - -
Gma02g02746 468 SUPERFAMILY CoA-dependent acyltransferases 238 467 - -
Gma02g02746 468 SUPERFAMILY Single hybrid motif 99 188 IPR011053 -
Gma02g02746 468 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 238 466 IPR001078 GO:0016746
Gma02g02746 468 TIGRFAM sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 204 467 IPR006255 GO:0004149|GO:0006099|GO:0045252
Gma02g02746 468 Pfam Biotin-requiring enzyme 101 173 IPR000089 -
Gma02g02746 468 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02746 Gma-Chr2 53133268 53139428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02746 101 466 Acyl Lipid Metabolism Gene Families AT1G54220 29.070 4.82e-42 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02746 K00658 - gmx:100799149 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02746 02 53133268 53139428 Gma14g00191 14 1597220 1602809 ECH
Gma02g02746 02 53133268 53139428 Gma02g02746 02 53133268 53139428 ECH
Gma14g00191 14 1597220 1602809 Gma02g02746 02 53133268 53139428 GST