Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02073 ATGTGTAATCCAAAGCCATCTTCCGTATCCCCATTTCTCAGTCCCACAAAATCCCACCCCAAAGTTGTGTACCCTTCCGCTGAATCTGATGATCAAGTTCAAGATGAATTGCACAGATGGCCTACTCTTAATGAGGCCATGGAAGAAATCAAGGCAATTGGGAGGATATCATGCCCAACAGCCATCACAGGATTAATCCTATATTCAAGAGCTATGATCTCTATGATTTTCCTTGGCTACCTTGGTGAGATGGAACTAGCAGGAGGGTCTCTCTCCATTGGTTTTGCCAACATCACTGGCTACTCTGTGATTTCTGGATTAGCCATGGGAATGGAACCAATCTGTGGACAAGCATATGGAGCAAAGCAATGGAAGATTCTTGGCTTGACACTTCAGAGAACCGTTCTCCTTCTACTCTCAACCTCCATCCCCATCTCATTCATGTGGCTCAACATGAAGAGAATCCTCTTGTGGTCAGGCCAAGACCAAGAAATAGCATCAGTGGCACAAACCTTCATCACTTTCTCAATCCCTGACCTCTTCTTGCTCTCACTCCTCCACCCTCTAAGAATCTACCTCAGGACTCAAAGCATCACATTGCCACTCACATATTGCTCAGCCATCTCAGTTCTTCTCCATGTGCCTCTGAATTTCCTCCTTGTGGTTCACCTCAAGATGGGAATTGCTGGGGTGGCAACAGCAATGGTGCTAACTAACCTCAACCTTATTCTCTTTATTTCCTCCTTTGTGTACTTTTCTGGTGCATACAAGGCCTCATGGGTTTCCCCTAGTGTGGACTGCATCAAAGGGTGGTCCTCATTGCTATCACTTGCAATTCCAACTTGTGTCTCAGTTTGCCTTGAGTGGTGGTGGTATGAGTTCATGATAATGCTGTGTGGCCTTTTGGTGAATCCAAAAGCAACCATTGCTTCAATGGGGATCCTAATCCAAACAACATCTTTGGTCTATGTGTTCCCATCATCACTCAGCCTTGGTGTTTCAACAAGGGTAGGGAATGAGTTAGGTGCAAAGAATCCTAGAAAGGCAAGAGTGTCAATGATAGTTTCACTCTTTTGTGCTCTGGCTTTAGGCCTTGCAGCAATGCTATTCACCACCTTGATGAGGCACCAATGGGGGAGATTCTTCACCAATGACCATGAAATTTTGGAACTTACATCACTGGTGCTGCCAATTGCTGGCCTTTGTGAGCTTGGGAACTGCCCTCAGACCACAGGCTGTGGAGTCCTGAGGGGAAGTGCAAGACCAACCATTGGTGCCAACATCAATTTGGGCTCATTTTATTTGGTGGGTATGCCAGTGGCTATCCTTTTGAGCTTTGTGGCCAAAATGGGGTTTCCAGGGCTCTGGCTTGGGTTGCTTGCAGCCCAAGCCTCATGTGCCGGCCTCATGTTCTATGTTCTTTGTACAACAGATTGGAATGTGCAAGTGGAAAGAGCCAAGGAACTCACAAAATCTTCAACAACAACAACTACTGCTATGACTGCGACTATTGCTACGACTTCTTGTTCTACTTCTCCTAATTGTAACTACAAATTGTTACCTACACTCACCAAAAAAGAAGCTAACATGAACAAGAATGCACATGTTTGTCTCGAAGAGATAGTTATTACTAGTGGTGGTGGTGGTGATGAGCTTACCAAGATATCTTCAGTTGAAACAGATCCACTGATCATTCCAACTACCAAACATACTCAAGTTTAG 1722 0.4512 MCNPKPSSVSPFLSPTKSHPKVVYPSAESDDQVQDELHRWPTLNEAMEEIKAIGRISCPTAITGLILYSRAMISMIFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKILGLTLQRTVLLLLSTSIPISFMWLNMKRILLWSGQDQEIASVAQTFITFSIPDLFLLSLLHPLRIYLRTQSITLPLTYCSAISVLLHVPLNFLLVVHLKMGIAGVATAMVLTNLNLILFISSFVYFSGAYKASWVSPSVDCIKGWSSLLSLAIPTCVSVCLEWWWYEFMIMLCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGAKNPRKARVSMIVSLFCALALGLAAMLFTTLMRHQWGRFFTNDHEILELTSLVLPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAILLSFVAKMGFPGLWLGLLAAQASCAGLMFYVLCTTDWNVQVERAKELTKSSTTTTTAMTATIATTSCSTSPNCNYKLLPTLTKKEANMNKNAHVCLEEIVITSGGGGDELTKISSVETDPLIIPTTKHTQV 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02073 573 TIGRFAM matE: MATE efflux family protein 66 456 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma02g02073 573 Pfam MatE 59 219 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma02g02073 573 Pfam MatE 280 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma02g02073 573 CDD MATE_eukaryotic 49 485 IPR045069 GO:0042910|GO:1990961
Gma02g02073 573 PANTHER PROTEIN DETOXIFICATION 29 503 - -
Gma02g02073 573 PANTHER MULTIDRUG RESISTANCE PROTEIN 29 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02073 Gma-Chr2 46512956 46514914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02073 K03327 - gmx:100783792 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02073 02 46512956 46514914 Gma02g02073 02 46512956 46514914 ECH