Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02072 ATGGCTGTTTCAACAAGTTTCCCTGGTGCAAAGTTGGAGGCTTTGTTGCTGAAATGTGGCTCCTCCAATGCTGCCACTGCCACTGCCACCACCACCACCCATTTGTCATGTTTTTGCAAAACCAGAAAGACACTTGTTCAGAGTCAGAGAGGGCCTATTCGCTGTGAGGCTTCTTCTGCTTCTGATGTTGTGGCTGATGCCACTAAGAAAGCTGCTAGTGTCTCTGCTCTTGAACAGCTTAAGACCTCTGCAGCTGATAGGTATACAAAGGAAAGGAGCAGCGTCATGGTTATTGGACTGAGTGTGCATAGTACGCCTGTGGAAATGCGTGAAAAGCTTGCCATACCAGAAGCAGAATGGCCTCGAGCCATTGCGGAGCTTTGTAGTCTGAATCACATTGAGGAAGCAGCTGTTCTGAGCACCTGCAACAGAATGGAAATATATGTTGTTGCTCTGTCCAAGCACCGTGGTGTTAAAGAAGTCACTGAATGGATGTCCAAAACAAGTGGGATTCCAGTTGCAGATCTTTGCCAGCATCAGTTTCTGCTATACAACAAAGATGCCACACAACACCTTTTTGAAGTATCTGCAGGTCTTGATTCTCTAGTGTTGGGAGAAGGTCAAATCCTTGCCCAGGTGAAGCAGGTTGTCAAAGTTGGACAAGGAGTGAATGGCTTTGGGAGGAACATTAGTGGACTATTCAAGCATGCAATCACTGTGGGGAAGAGGGTTAGAACTGAGACAAACATTGCTGCTGGTGCAGTTTCTGTTAGCTCAGCAGCTGTTGAACTGGCCCTGATGAAGCTACCTGAAGCCTCACATGCCAATGCAAGGATGTTGGTCATTGGAGCTGGGAAGATGGGAAAGCTTGTGATCAAGCATTTGGTGGCAAAAGGGTGCACAAAGATGGTGGTTGTCAATAGAAGTGAGGAGAGAGTTGCCGCGATCCGTGAAGAAATCAAGGATGTTGAGATAATCTACAAGCCACTCTCGGAGATGCTCACATGCATTGGTGAGGCAGATGTGGTTTTCACCAGCACAGCATCAGAGAATCCACTGTTCTTGAAGGATGATGTCAAGGAACTTCCTCCCGCCACCGATGAAGTCGGCGGCCATCGCCTTTTCGTCGATATATCTGTTCCTAGGAATGTTGGATCATGTCTCTCAGACCTTGAGTCTGTGAGAGTGTACAATGTTGATGACCTTAAGGAGGTTGTGGCAGCCAACAAAGAGGATAGGCTAAGAAAAGCCATGGAGGCTCAAGCAATCATTGGTGAAGAATCAAAACAATTTGAGGCTTGGAGAGACTCATTGGAAACTGTTCCTACCATTAAAAAGTTGAGGGCATATGCTGAAAGAATAAGGCTTGCTGAGCTTGAGAAGTGCCTAGGTAAGATGGGTGATGATATCAACAAGAAGACACAAAGAGCTGTGGATGATCTTAGCAGGGGTATAGTGAATAAGTTGCTTCATGGGCCAATGCAACACTTGAGGTGTGATGGCAGTGACAGCAGGACTCTAAGTGAGACCCTTGAGAACATGCATGCTTTGAATAGAATGTTCAACCTTGAGACTGAAATATCTGTTTTGGAGCAGAAGATTCGAGCCAAGGCTTAA 1617 0.4638 MAVSTSFPGAKLEALLLKCGSSNAATATATTTTHLSCFCKTRKTLVQSQRGPIRCEASSASDVVADATKKAASVSALEQLKTSAADRYTKERSSVMVIGLSVHSTPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVVALSKHRGVKEVTEWMSKTSGIPVADLCQHQFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEASHANARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEIKDVEIIYKPLSEMLTCIGEADVVFTSTASENPLFLKDDVKELPPATDEVGGHRLFVDISVPRNVGSCLSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLGKMGDDINKKTQRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFNLETEISVLEQKIRAKA 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02072 538 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 537 - -
Gma02g02072 538 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 419 523 IPR015896 GO:0008883|GO:0033014|GO:0050661
Gma02g02072 538 PANTHER GLUTAMYL-TRNA REDUCTASE 1 537 - -
Gma02g02072 538 Gene3D - 93 253 IPR036343 GO:0008883|GO:0033014|GO:0050661
Gma02g02072 538 Gene3D - 254 406 - -
Gma02g02072 538 ProSitePatterns Glutamyl-tRNA reductase signature. 191 214 IPR018214 GO:0008883
Gma02g02072 538 Coils Coil 306 326 - -
Gma02g02072 538 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 253 413 IPR036291 -
Gma02g02072 538 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 417 521 IPR036453 GO:0008883|GO:0033014|GO:0050661
Gma02g02072 538 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 95 250 IPR036343 GO:0008883|GO:0033014|GO:0050661
Gma02g02072 538 CDD NAD_bind_Glutamyl_tRNA_reduct 96 417 - -
Gma02g02072 538 TIGRFAM hemA: glutamyl-tRNA reductase 95 504 IPR000343 GO:0008883|GO:0033014|GO:0050661
Gma02g02072 538 Hamap Glutamyl-tRNA reductase [hemA]. 94 521 IPR000343 GO:0008883|GO:0033014|GO:0050661
Gma02g02072 538 Pfam Shikimate / quinate 5-dehydrogenase 263 405 IPR006151 -
Gma02g02072 538 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 98 248 IPR015895 GO:0008883|GO:0033014|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02072 Gma-Chr2 46458930 46462147 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02072 K02492 - gmx:100819951 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02072 02 46458930 46462147 Gma02g02072 02 46458930 46462147 ECH
Gma14g01845 14 49063755 49067745 Gma02g02072 02 46458930 46462147 GST