Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02020 ATGGGTGTGAAGCACACCACCACCACCACCACCACAATTCTTTTCACTTCAATGCTACTTCACCTCTCCATCATAGCCATTGCCAACGATCCATGCGCTTCTCAACACGACGACGACGACTCCGACATCACCATGATTCCCATCTACGGCAATTGCTCGCCTTTCAAGAACTACTCAACCTCGTGGGAGAACATCATCATCGACATGGCCTCCAAGGACCCAGAAAGAGTCGTGTACTTGTCTAGCCTCGACGCCTCATTGAGGAGAAAGCCCATTTCCGCAGCCCCAATCGCTTCGGGCCAAGCCTTCGGGATTGGTAGCTACGTGGTCCGAGTGAAACTGGGTTCGCCGAACCAACTATTTTTTATGGTTCTGGATACCAGCACCGATGAGGCTTGGGTACCGTGTACCGGCTGCACTGGTTGCTCTTCCTCCTCCACCTATTATTCCCCTCAAGCCTCCACCACTTATGGCGGCGCCGTAGCTTGCTACGCCCCGCGTTGTGCCCAGGCTCGTGGTGCCCTCCCTTGCCCCTACACTGGTTCTAAAGCTTGCACATTCAACCAATCCTATGCAGGCTCCACATTCTCCGCCACTCTCGTGCAAGACTCTCTCAGATTGGGCATCGACACCCTACCAAGCTACGCTTTCGGGTGCGTCAACTCTGCCTCCGGCTGGACGCTCCCGGCCCAAGGCCTATTGGGCTTGGGCCGCGGGCCCTTGTCACTTCCTTCCCAATCCTCCAAACTCTACTCCGGCATTTTCTCCTACTGCCTCCCAAGTTTCCAGTCCTCCTACTTCTCTGGGTCCCTCAAACTTGGGCCCACGGGCCAGCCTAGGCGAATCCGGACCACCCCGCTCCTCCAAAACCCGCGTCGGCCCTCTCTTTACTACGTGAACCTCACCGGCGTCACCGTGGGCCGGGTTAAGGTCCCATTACCCATAGAATATCTGGCGTTCGACCCGAATAAGGGCTCCGGAACCATCCTAGATTCTGGCACGGTCATAACCCGGTTCGTAGGACCGGTTTACAGTGCAATAAGGGATGAGTTTAGAAACCAAGTGAAGGGACCGTTCTTCAGCAGAGGTGGTTTTGACACGTGCTTTGTGAAAACCTACGAGAATTTGACGCCCTTGATCAAGCTTCGCTTCACGGGCTTGGATGTGACTTTGCCCTACGAGAACACCCTCATACACACCGCCTACGGCGGCATGGCGTGCTTGGCGATGGCGGCGGCGCCGAATAACGTGAACTCGGTGCTCAATGTCATTGCCAACTATCAGCAACAGAACCTTAGGGTTTTGTTTGATACCGTTAATAATCGGGTTGGCATAGCGCGAGAGCTTTGTAACTAG 1356 0.5494 MGVKHTTTTTTTILFTSMLLHLSIIAIANDPCASQHDDDDSDITMIPIYGNCSPFKNYSTSWENIIIDMASKDPERVVYLSSLDASLRRKPISAAPIASGQAFGIGSYVVRVKLGSPNQLFFMVLDTSTDEAWVPCTGCTGCSSSSTYYSPQASTTYGGAVACYAPRCAQARGALPCPYTGSKACTFNQSYAGSTFSATLVQDSLRLGIDTLPSYAFGCVNSASGWTLPAQGLLGLGRGPLSLPSQSSKLYSGIFSYCLPSFQSSYFSGSLKLGPTGQPRRIRTTPLLQNPRRPSLYYVNLTGVTVGRVKVPLPIEYLAFDPNKGSGTILDSGTVITRFVGPVYSAIRDEFRNQVKGPFFSRGGFDTCFVKTYENLTPLIKLRFTGLDVTLPYENTLIHTAYGGMACLAMAAAPNNVNSVLNVIANYQQQNLRVLFDTVNNRVGIARELCN 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02020 451 Gene3D Acid Proteases 84 274 IPR021109 -
Gma02g02020 451 SUPERFAMILY Acid proteases 101 450 IPR021109 -
Gma02g02020 451 Gene3D Acid Proteases 275 451 IPR021109 -
Gma02g02020 451 PANTHER ASPARTYL PROTEASE AED3 9 451 - -
Gma02g02020 451 Pfam Xylanase inhibitor N-terminal 108 274 IPR032861 -
Gma02g02020 451 PANTHER ASPARTYL PROTEASE-RELATED 9 451 IPR001461 GO:0004190|GO:0006508
Gma02g02020 451 ProSiteProfiles Peptidase family A1 domain profile. 108 446 IPR033121 -
Gma02g02020 451 Pfam Xylanase inhibitor C-terminal 297 446 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02020 Gma-Chr2 45764743 45766976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02020 81 451 Miscellaneous Gene Families AT1G77480 26.173 2.15e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02020 - - gmx:100809988 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02020 02 45764743 45766976 Gma02g02020 02 45764743 45766976 ECH