Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02009 ATGAGAGACAAGTCAGAGAGCCATCCTTCGACAAACTCCGAGGACGACCACCGATCCTCCCCCTTGCTGGATCTGGCGTGTGCCGAAATCACCGAATCCTCCAACAGCAAGACCCGAACCTGCGGCCCGTTTCCTGGTTCGGGCCCCTCCGAGCCTCAGGCTCCGTTCCCGGACCAGGTCCTCGAGAACGTCCTTGAGAACGTGCTCCACTTCCTCCCCTCCCGCCGCGACCGCAACGCCGCCTCATTGGTTTGCCGCTCCTGGTACCGTGCGGAGGCCCTCACCCGATCCGAGCTCTTCATCGGCAACTGCTACGCGCTCTCCCCCACTCGCGCCACCGCCCGCTTCACGCGCGTCATGTCCGTCACCGTCAAAGGGAAACCCCGCTTCGCCGACTTCGATCTGATGCCTCCCGATTGGGGGGCCCACTTCGGCCCGTGGGCCTCTGCTTTGGCCCAGGCCTACCCCTGGCTCGAGAAGCTCCACCTCAAGCGCATGTTAGTCACCGACGCCGACCTCGCCCTAATCGCGGACTCCTTCGCCGGTTTCCGCGAACTCGTCCTCGTTTGCTGCGAGGGCTTCGGAACTCCCGGCCTCGCCGCCGTCGCCTCCAAGTGCAGATTGCTGAGGGTGCTTGAGCTTGTGGAATCTGTGGTGGAGGTTGAGGACGATGAGGAGGTGGATTGGATTTCGTGTTTTCCCGAGACTCAAACCAATATGGAGTCTCTTGTGTTTGATTGTGTTGAGGTTCCTATTAATTTTGAGGCTTTGGAGGGTTTGGTGGCTAGGTCGCCTCGCTTGAAGAAGCTTCGATTGAACCAATTCGTCTCCATGGCTCAGCTATATCGTCTGCTGCTTCGAGCTCCGCAGCTTACTCATCTTGGAACGGGTTCTTTCAGTGCTACTGAGGCTGGGGTGGTCGGGGACCAGGAGCCGGATTACGCGGCCGCATTTGAGGCTTGCAGATCCCTGGTTTGCCTGTCTGGATTCAGAGAGATTTGGGCAGATTACCTTCCCGCGATTTATCCAGTCTGTGCGAATCTGACGTCCTTGAATTTGAGCTATGCTGACATTAACACGGATCAGCTGAAGTCGGTTATTTGCCACTGCCATAAGCTGCAGATATTCTGGGTACTTGATTCGATACGTGATGAGGGGCTTCAGGCGGTGGCTGCAACTTGCAAGGACTTGCGCGAGCTTCGGGTTTTTCCTATGGACGCGAGGGAGGAGACTGATGGGCCTGTTTCTGAGGTGGGGTTTGAAGCGATTTCTCAGGGTTGTAGGAAGTTGGAATCGATTTTGTTTCTCTGCCAGAGGATGACTAATGCGGCTGTGGTGGCTATGTCAAAGAACTGCCCGGATCTTGTGGTGTTTCGTCTATGTATAATTGGGCGGTATAGGCCGGATCCTGTGACTCAGGAACCCATGGATGAGGGTTTTGGTGCTATTGTTATGAATTGCAAGAAGCTCACTCGGCTGGCTGTGTCTGGCTTGCTGACTGATCGTGCTTTTGAGTACATTGGGACGTATGGGAAATTGGTTAGGACGTTGTCAGTTGCCTTTGCTGGGGACACTGATGTTGGCCTTAAATATGTGCTTAAAGGATGCCCTAATTTGCAAAAGCTTGAAATCAGGGATAGTCCTTTTGGGGATGGAGCTCTGAGATCCGGTTTGCATCATTATTACAACATGAGATTCCTCTGGATGTCGACTTGTAAATTGACGCTCCAAGCTTGCCAAGAGGTTGCACGAGTATTGCCTAACCTGGTTTTTGAAGTAATTAACAACAGTGAGGAGAATGCGGGTGATGAAGTTGAGACATTATACATGTATCGGTCTCTTGATGGGCCACGGGATGATGCTCCAAGATTTGTTACCATCTTGCAATAG 1890 0.5392 MRDKSESHPSTNSEDDHRSSPLLDLACAEITESSNSKTRTCGPFPGSGPSEPQAPFPDQVLENVLENVLHFLPSRRDRNAASLVCRSWYRAEALTRSELFIGNCYALSPTRATARFTRVMSVTVKGKPRFADFDLMPPDWGAHFGPWASALAQAYPWLEKLHLKRMLVTDADLALIADSFAGFRELVLVCCEGFGTPGLAAVASKCRLLRVLELVESVVEVEDDEEVDWISCFPETQTNMESLVFDCVEVPINFEALEGLVARSPRLKKLRLNQFVSMAQLYRLLLRAPQLTHLGTGSFSATEAGVVGDQEPDYAAAFEACRSLVCLSGFREIWADYLPAIYPVCANLTSLNLSYADINTDQLKSVICHCHKLQIFWVLDSIRDEGLQAVAATCKDLRELRVFPMDAREETDGPVSEVGFEAISQGCRKLESILFLCQRMTNAAVVAMSKNCPDLVVFRLCIIGRYRPDPVTQEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFEYIGTYGKLVRTLSVAFAGDTDVGLKYVLKGCPNLQKLEIRDSPFGDGALRSGLHHYYNMRFLWMSTCKLTLQACQEVARVLPNLVFEVINNSEENAGDEVETLYMYRSLDGPRDDAPRFVTILQ 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02009 629 SUPERFAMILY F-box domain 56 91 IPR036047 GO:0005515
Gma02g02009 629 Pfam F-box 58 97 IPR041567 -
Gma02g02009 629 SUPERFAMILY RNI-like 83 590 - -
Gma02g02009 629 MobiDBLite consensus disorder prediction 29 43 - -
Gma02g02009 629 Gene3D - 55 96 - -
Gma02g02009 629 MobiDBLite consensus disorder prediction 1 22 - -
Gma02g02009 629 MobiDBLite consensus disorder prediction 1 54 - -
Gma02g02009 629 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 46 627 - -
Gma02g02009 629 PANTHER F-BOX PROTEIN FBX14 46 627 - -
Gma02g02009 629 Pfam Transport inhibitor response 1 protein domain 118 163 IPR041101 -
Gma02g02009 629 Gene3D Ribonuclease Inhibitor 98 628 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02009 Gma-Chr2 45564656 45566792 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02009 - - gmx:100807836 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02009 02 45564656 45566792 Gma02g02009 02 45564656 45566792 ECH
Gma14g01790 14 48170231 48173403 Gma02g02009 02 45564656 45566792 GST