Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02004 ATGGGCGACTTCACGGTTGCGTTAAACCCTCCCAAAACCTTCCGCGCCGATATTCTCCTATCCACCACCAACAACCGCACTTCCCCGGCGGCGCGTGGCTTTCAAACCGTACTCGCGTTCAAACCACCGCGCGCTTTTCGAGGAATCCGCGCTTCGGTGATGCCAAGAGAGGGTCAACAAGCGTCTCTCGGAGACGCCCTTGTCAACACTCCGCGCCGAAGCGACTTCGTTGAGGCCATCAGAAGAACCGCCGCACTCTCCAACTGCCTCTCAGAAACGAGCCTCCACGCCACCGTTCCCGGCCTCGAGTCCAAAACCCGCGGCAAAGTTCGAGATATATACGACGCTGGGGATTACCTCGTTTTGGTGACCACTGATCGGCAGAGTGCGTTTGATCGGATTCTTGCTTCCATTCCTTTCAAAGGCCAGGTTCTCAATCAGACGAGTTTGTGGTGGTTTGAAAGAACTAAGCATATCGTCTCTAATGCGGTTGTATTGGCTCCAGATAACAATGTTACAATAGCTAGGAAATGTTCAGTTTTCCCAGTTGAGTTTGTTGCTAGAGGGTTTGTCACTGGAAGTACTGATACATCTCTATGGACAGTCTACAATAAAGGCGTTCGGAACTATTGTGGAAATGTCATTCCAGATGGAATGGTAAAAAATCAGAAGTTGCCTAAAAATATACTCACTCCAACAACCAAGGCTGCAGATCATGATGTTCCTATCACTCCAGATGAGATTATAGACAGGGGACTGATGACTCGAGCTGATTATGTAGAAGTTAGTGAAAAAGCATTATCCTTGTTTGAATATGGGCAGCAAGTGGCTTTGGAGCATGGCCTCATATTGGTAGATACTAAGTATGAGTTTGGGAAGGCAAATGATGGTTCAATTATGTTGATTGATGAGGTCCATACTCCTGATTCAAGTAGATATTGGATAGCCAATTCTTACCTGGAGCGCTTTCAAAATGGTCTTGAGCCTGAAAATATTGACAAGGAGTTTTTGAGGCTGTGGTTTATAAGTCACTGCAACCCTTATGAAGATGAGGTCCTTCCTGATGCTCCTGAAGATCTTGTCTGTGAATTAGCCTGGCGATACATTTTCTTGTATGAGACTATAACAAAATCAAAGTTTGAGGTGCCATCGACTGAGGAGCCTATACATGACCGAATTACACGAAATGTTGCATCTGCACTGTCATCCCTAAAGTAG 1218 0.4639 MGDFTVALNPPKTFRADILLSTTNNRTSPAARGFQTVLAFKPPRAFRGIRASVMPREGQQASLGDALVNTPRRSDFVEAIRRTAALSNCLSETSLHATVPGLESKTRGKVRDIYDAGDYLVLVTTDRQSAFDRILASIPFKGQVLNQTSLWWFERTKHIVSNAVVLAPDNNVTIARKCSVFPVEFVARGFVTGSTDTSLWTVYNKGVRNYCGNVIPDGMVKNQKLPKNILTPTTKAADHDVPITPDEIIDRGLMTRADYVEVSEKALSLFEYGQQVALEHGLILVDTKYEFGKANDGSIMLIDEVHTPDSSRYWIANSYLERFQNGLEPENIDKEFLRLWFISHCNPYEDEVLPDAPEDLVCELAWRYIFLYETITKSKFEVPSTEEPIHDRITRNVASALSSLK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02004 405 Pfam SAICAR synthetase 106 351 IPR028923 -
Gma02g02004 405 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 59 404 - -
Gma02g02004 405 ProSitePatterns SAICAR synthetase signature 2. 284 292 IPR018236 GO:0004639|GO:0006164
Gma02g02004 405 SUPERFAMILY SAICAR synthase-like 97 380 - -
Gma02g02004 405 Gene3D Phosphorylase Kinase; domain 1 92 180 - -
Gma02g02004 405 Gene3D - 181 325 - -
Gma02g02004 405 CDD SAICAR_synt_Sc 107 376 - -
Gma02g02004 405 ProSitePatterns SAICAR synthetase signature 1. 180 194 IPR018236 GO:0004639|GO:0006164
Gma02g02004 405 Hamap Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 102 395 IPR028923 -
Gma02g02004 405 PANTHER BNAC03G41880D PROTEIN 59 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02004 Gma-Chr2 45502694 45509150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02004 K01923 - gmx:100805369 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02004 02 45502694 45509150 Gma02g02004 02 45502694 45509150 ECH
Gma14g01785 14 48050118 48056503 Gma02g02004 02 45502694 45509150 GST