Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01987 ATGCAGAAACGCAAGTGGATTCCGTTGGCGGTGCTGAGAAAGTTGCTAATTGCGGCCATATGCTCCATAGCGTTTGTGGCTCTCTTCTCTGTTCGCGTACACATTATTCCTTCTTCTAAAGATCACAGGTTCAACGACAAGATCTCAACGACTCAGGATCCACAAAGCTGGACGCGGGAGCTCGCACCACCCCATTTATCCAAAGCTCCACTTCCTACTCCCAAGTTGAGTGGTTCAAGAGGGAATTTTGATTACCAGAAGCTGTGGAAGACTCCATCAAATCATGGGTTTCTGCCCTGTACAAACCCTACACCTAATTACACCACTCCTGCCGAATCGCGAGGATATCTTTTAGTTCATACAAATGGCGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTAGCTCGAATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAGGTCATTTTGGCAAGATACTAGCAATTTCTCTGATATTTTTGACGAAGAGCATTTTATGAATTCTCTAGCTAATGATGTAAAAATCATTAAGAAACTTCCCAAAGAATTGGTTAATGCAACCAGAGTGGTCAAGCAATTCATAAGCTGGTCTGGCATGGATTACTATGAGAATGAGATTGCTAGCTTGTGGGAAGATTACCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCAAACAACAATCTACCTCCAGACATTCAGAAGCTTCGCTGCCGGGCTTGTTATGAAGCACTTCACTTCTCTCCTCTCATTGAACAAATGGGAAAATTGTTGGTGGAGAGGATGAGGTCATTTGGTCTCTATATTGCATTGCATTTGCGTTATGAGAAGGATATGCTCGCATTTAGTGGGTGCACCCATGATTTATCTCTAGTTGAAGCTGAAGAGCTACGGTTGATCAGAGAGAACATTTCCTATTGGAAAATAAAGGACATTGATCCAATAGAACAGAGGTCCAAAGGGCTTTGCTCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACCGCTCTCGGATACCCATCAACAACTCCAATATATATTGCTGCTGGAGAGATATATGGGGGCGAGTCCCACATGGCTGAACTGCATTCCCGATATCCATTGTTGATGAGCAAGGAAAAGTTGGCATCCATAGAAGAGCTTGAACCTTTTTCTAATCATGCATCCCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTTATACCTTCTTATTCCGGAAATATGGCAAAGGCTGTTGAGGGTCATCGCCGTTTTCTTCGACGTGGAAGAACAGTATCTCCAGACAAGAAAGCCCTTGTTCATCTGTTCGATAAACTGGATCAGGGAATAATAACTGAGGGGAAGAAACTATCAAATAGGATTATTGATCTCCACAGAAGACGACTTGGTTCTCCCAGGAAGAGAAAAGGGCCAATTTCTGGAACAAAGCACATGGACAGGTTTCGGTCAGAAGAAGCCTTTTATGCTAATCCCTTGCCTGATTGTTTATGCCAGACAGAGACATAA 1545 0.4259 MQKRKWIPLAVLRKLLIAAICSIAFVALFSVRVHIIPSSKDHRFNDKISTTQDPQSWTRELAPPHLSKAPLPTPKLSGSRGNFDYQKLWKTPSNHGFLPCTNPTPNYTTPAESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDIFDEEHFMNSLANDVKIIKKLPKELVNATRVVKQFISWSGMDYYENEIASLWEDYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALHFSPLIEQMGKLLVERMRSFGLYIALHLRYEKDMLAFSGCTHDLSLVEAEELRLIRENISYWKIKDIDPIEQRSKGLCSLTPKEVGIFLTALGYPSTTPIYIAAGEIYGGESHMAELHSRYPLLMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGHRRFLRRGRTVSPDKKALVHLFDKLDQGIITEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKHMDRFRSEEAFYANPLPDCLCQTET 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01987 514 CDD O-FucT_plant 116 437 IPR024709 -
Gma02g01987 514 PIRSF UCP009360 1 514 IPR024709 -
Gma02g01987 514 PANTHER OS02G0726500 PROTEIN-RELATED 4 513 - -
Gma02g01987 514 MobiDBLite consensus disorder prediction 44 78 - -
Gma02g01987 514 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
Gma02g01987 514 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 4 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01987 Gma-Chr2 45263546 45268644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01987 60 513 Miscellaneous Gene Families AT1G22460 69.163 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01987 - - gmx:100800040 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01987 02 45263546 45268644 Gma02g01987 02 45263546 45268644 ECH
Gma14g01767 14 47768369 47774355 Gma02g01987 02 45263546 45268644 GST
Gma02g01987 02 45263546 45268644 Gma04g00912 04 9205362 9210314 PCT
Gma02g01987 02 45263546 45268644 Gma06g00899 06 8291577 8298000 PCT
Gma04g00912 04 9205362 9210314 Gma02g01987 02 45263546 45268644 PCT
Gma06g00899 06 8291577 8298000 Gma02g01987 02 45263546 45268644 PCT