Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01295 ATGGCTGCTTCATTCTCAAGCATGCTCATTATTCCCTCTTCCAAAATAAGCTACGAAGCTAGCTTGGGAGGATTAAGCTTCCACAACTTCCTAACAGCAAAATCACCACCTCTGAAGCGAAACCAAAAGTCAATAAAAGTTGTTACACGCGATAACCACTCACCCCTGGTCGACGACCTCATGATAGAAGTACAAGAACATGAACATGAACATGCAACGCTGCATCAGAAAGATCTCTCAGAAATGTGGCGCCAAATCCACGGTGAGAAGAACTGGGAAGGGCTTCTAGAGCCCATGGACCCTCTTTTGAGGTCGGAGGTGATCCGCTACGGCGAGCTGGCGCAGGCCTGCCACGACGCCTTCGACTACGAGCCATTCTCTAGGTACTGCGGCACATGCAGGTTCGAGGAGGAGAAGTTCTTCTCCTCCCTGGGCATGACCCATCACGGATACAAGGTGACGCGCTACATCCACCTCACGGCCAACACCGACTTCCTCCTAAAGTGGTTGATTCACTCAAAGTGGCCAACGGCGATGGGGAGCAAGGTGAACTGGGGCGGATATGTGGCAGTTTCGAACGACGACACGAGTCGCTGCCTCGGGAGAAGAGACATCGTGATTGCATGGCGGGGGACGACCACACACCTGGAAGGGGAGAAGGACCTCAGGTCTAGCCTCACACCTGTATCATCCAAGGGCATCCCGTGCCACGATGATGGGGTTAAGGTCGACAATGGGTTCTTAGATATGTACACGGGTAAAGATGAGACATCAGAATACTGCCAGCACTCGGCGAGAGATCACGTTCTAAGGGAGGTGAAGCGGTTGATGGACATGTATAGTGAGGAGGAAGTGAGCATTACGGTGACGGGGCATAGTCTGGGGAGTGCTTTGGCGATTTTGAGCGCTTATGATATTGTCGAAAAGGGGTTGGACAGGGGTGTGCCGGTTTCGGTGATGTCGTTTTCTGGTCCCGCGGTTGGGAACAAGTCTTTTCATAAAAGGTTGAAGAAGCTTGGGATAAAGGTGTTGAGGGTGATCAACGCGAATGATTGGGTGCCCTGGTTTTCTCTTTGGTTGCCTCCTTTTCAATACTACCATGTTGGAGTGGAACTCAAGTTGGACAACAACAAATCACCGTTTTTGAAACACGATGTAGACTGTGCCCATAACTTGGAGGTTCTTCTGCATTTGCTCGACGGATACCATGGAGAGCGGGGGGAATTCATGCTAGCGAGTGATAGGGATCATGCTCTGGTGAACAAGGGAGGTGATTTCCTGAAAGAAAGTTACTTGGTTCCACCAAACTGGTGGCAAGATGAAAACAAGGGCTTGAAGAGGAGCTCAGATGGACGCTGGGTACAGCCTGAGCGAACAATTGAGGTCGACGGTTACCCTTAA 1401 0.5089 MAASFSSMLIIPSSKISYEASLGGLSFHNFLTAKSPPLKRNQKSIKVVTRDNHSPLVDDLMIEVQEHEHEHATLHQKDLSEMWRQIHGEKNWEGLLEPMDPLLRSEVIRYGELAQACHDAFDYEPFSRYCGTCRFEEEKFFSSLGMTHHGYKVTRYIHLTANTDFLLKWLIHSKWPTAMGSKVNWGGYVAVSNDDTSRCLGRRDIVIAWRGTTTHLEGEKDLRSSLTPVSSKGIPCHDDGVKVDNGFLDMYTGKDETSEYCQHSARDHVLREVKRLMDMYSEEEVSITVTGHSLGSALAILSAYDIVEKGLDRGVPVSVMSFSGPAVGNKSFHKRLKKLGIKVLRVINANDWVPWFSLWLPPFQYYHVGVELKLDNNKSPFLKHDVDCAHNLEVLLHLLDGYHGERGEFMLASDRDHALVNKGGDFLKESYLVPPNWWQDENKGLKRSSDGRWVQPERTIEVDGYP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01295 466 Coils Coil 57 77 - -
Gma02g01295 466 SUPERFAMILY alpha/beta-Hydrolases 179 400 IPR029058 -
Gma02g01295 466 Pfam Lipase (class 3) 206 357 IPR002921 GO:0006629
Gma02g01295 466 CDD Lipase_3 151 375 - -
Gma02g01295 466 PANTHER PHOSPHOLIPASE A1-IGAMMA2, CHLOROPLASTIC 37 463 - -
Gma02g01295 466 Gene3D alpha/beta hydrolase 82 463 IPR029058 -
Gma02g01295 466 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 37 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01295 Gma-Chr2 15027188 15031933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01295 73 458 Acyl Lipid Metabolism Gene Families AT2G30550 52.670 1.15e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01295 - - gmx:100779151 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01987 07 41244743 41246550 Gma02g01295 02 15027188 15031933 GST
Gma03g01463 03 40873495 40878209 Gma02g01295 02 15027188 15031933 PCT
Gma02g01295 02 15027188 15031933 Gma03g01463 03 40873495 40878209 PCT