Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01183 ATGAGCAACGCATATGTTAGCTCAACAATATATGCTGTTAGGTGTAAAGAACCATTTTCATTATCTTTCAATGGCTACTCAAACTTCTGTTACGAAAGATTTGACAGAACCCCATCATACTGTTTGTCATGCTGTGGTTGTTGTGATTACTGTTCAGTCTCCACTTACAGAGTACCCATAAAGCCTTGCCTTATAAATGGCTTGAGGCAATCTGCTCTTCTTCAATTGTCAGCTTCTAGAAGGTTGATATTGGGTGGAGGAGACCATTACCTTTCTCGGCTACCAGCTTATGGTGTCCTCAGAGGTTGTCAGGAGCTTAATTCTTCTGTCAATGAGAGAACTGATTATAGTAGTAGTAGTAGATGGAGAATAAAGGGAAGATATATTCGTGCTGCCTCCCAGAAAGGGAGAGAATTTTCCCATTCATTTGGTTCTGATGGTGCTGAAGCAGTTCTCAGCTTGTTGAGTGAGGAGGCAGATAAGGATGCTATTTGTAGCAAATGTAAGAATGCGTCTTCATCAAAAAGAGTGGAAGTTGATAAAAGAAAAAATGTGAGCAGAGAGAAACATTTGAGTTCGAGTGAGAAAGTAGAAACAGAGAAAAAAGGAATTTTGAAACGGCGTGAATCATCCTCCGTAGACTTGAGAAGAGAATATGGAAAAGCCAACCAAGAAAGGGAAGCCTTTGTAAAAAGTGAAAGCCATAGGAAACGAAGAGATGCATCTAGTTGTTCATCTTATTACTCTCTCTCATCAGGAGATTTTGGGAGTGAGCTGGAAGTTCAAGATGAGATTGGTTTGGAAGAGTTGTCACTGGAATATGAGAAGGATGAAGCAAATTGTCTGGAGGAAGTGAAGGAAGAATTCAACAGGCAAGGGGATGACTCAAAGAAGCTGCAGGCTGTTTCAAATAAGGGAAGAATTGCATTTGGTGTGGATATTGATTGGAACCTAAGGAACAAATCTGAAAAGAAGCTGATTGAGGGAACTCTGCAAAACACTGAATCCATAAGAGAACAACAGGATATGCATTCAAGAGAATTTAGAACACATGATTCTGGTCATAAAAAATCATCTATTTCACAAAAGCGAGTCAATAGTGAGGAAGATAAATCTTCTTTTATTGACAATTTGGATAAGAAAGCAAACAAGGCATATATTCAAACAGTAAACAGAAGAAAGCATCAATCTATAGATGTACAAGAGTCTGGTTGTGATGAAGTTGAGACAACTTTGTTATCACAAAAGAAATTCAGTGGCAGGGAAGGGAAGCTTGAGATATCAGAAACAATGTTGAAGGAAACAACTGATGAATATAAAAAGTTTGTTGGTTCAACTTCTACCACAGGAAAGGAAACTTTGACATCGAAGAAGGCATTCAGTGGCAGGGAAGGGAACCTGGCAATATCAGAAACACTTTCACAAGAAACAAATGATAAACATAAAAAAATTGTTGGTTCTACTTCTACCTCTGGAAGGGATGTGATAGATAGAAGTTCCCAGAAATATTCTGGAAATTTAAAAATTGAAGACACTGAAAGGACCTCAAATACTAGGATGAAGGACATGGGAGTGAAAAAAGTTTCAGTTTTGAGTTCTGTTCAGGGAGTGGATAAGCAGAAACACCAAAAAGGAGAGAAGATCATTACACAGATGAAGGATAAAGAGGGGAGAAAAAAATCTGAGCAATTTTCTGAAGTATCAGAAGCTCACAAGTCTAATGTTGAAGATACATCTAGCATAAAGTCTAGAACTAGATTAAAGAACATGGAAGAAAAATCAAACATAAGCTCAGATGCAAGGGTTACGTTGCTCCAAACAGATAAAAGGACAACTCAGAGTTTCCAACACAGGAAAGGATCTGAACTTGTCAGCACTTTATCAGAAGGCTATGTCAGTGATGAAAAGCAAGTTTCAAGTTCTCAAAAAGCTTATGAGAAGGTGAGATTAATTCCAAAAAGTAAATCAACATCACTTGTTAGAACTAGAGAAAGTTCTAGCCAAACTGATGAAAGGATTGCAAAATTTGAATTGGCCAGAGACGACCAAAGATCTTGCAACCTTTCAATTTCTGATGAAACTAACTCAAGAGAGGAATCCAGCTCCCAGGGATCATTGAGTTTGATTTCTGGGGCTGGAAAACATAGTATATTAGCATCAGGTGAAAAAAGAAGGTCTGCAACAATGTTGATCCCTTCCTCTTCTGAAATGGGTGGAGACTCAGTACAATTTGAACTCACTGCAGGAATTGCAAGCCCTGAGATCTTCCTTGGAACTTCAGAAAGTGGTTCTTCTGCTTTGTATGACAATTCAGGAAGAAGTTCTGCTTTGCATCCAGATGCTATCGATTTAGCTAATCGTTTAGAGAAGTCATCTAGACAGTTTGTTGATGAGTTTGCTGAGAGGGTCATGCATGAAGTAACGACTTCAGAAGCACAAGAGATGGAAGTTACAGGAACAAAGTTGACACTTGAAGTTGGTGGTGATCAGATCTACAGCTCAAGGCAACAAGGCACTCAAAATGACGCTCAGTCAAAGAAGCATGATTCTAGTCGTTCTTCTGGGTTTCCTGGGACAAAAGGACCTTCTGATGAGATGTGGGATGTCATGGAACCATCTGTTGAGCAAGGTCAAGTAGCCAAAGAAACGGATATCAGCAAGGAAACAGGGAAAGCAGTTGTTACTAGAACTGGGAGGTCCTTATGGGGTATGATTGGTGATATTGTTCAATTACGTTGGGGTTCACGTGCTGGTTCCTCCACTTCAGCTGGAAGATCAGCTGAGAGAAACTCACCAAACAAGTCTGACAGTGACACATGGTTTTCTGGGCAGGAGCATGAGGAAACCACTAAAACTAATGTCTTAAAAAAAACAAGTGTACCACCACAAGTCATGACTTCTGATAAGTTAAAACCAGGTAAACATTATACCCAAAGTGAGGGAGAGGTGTCTGACAATACAAAACTGAAAGACAGAGGAAAACATCTCGAAGTTGGATTGTCATCCCCAAATACATTGGAAAGTGGATCAATGTCAGTAGGCGCTTCTCATACTTCTGGAGAGGAAAATGTTAGTGGGACTGAGGATAAAAAAGATTTGAAAGCCACTACTTCTGGCACACAAAACATGGAATTACCAATTTCAGTACCTGCCAGAGGGCCTTCTATTGATGGAGAAATTGTAAGCATCGGTGGATCTGACATGTCTGGAGCTGAGTCAGTGGTTCCAATCAAGGAATCTATTGCTCCTGTGCGGTCTGAATTGTCCGGCTCAGAGAGAAAGGATGGAGAGTTGAAGCAAAGAAAGTTTCAACGGAACAGGCAAGTCTTGAGAGATAGGTTTGATGACTGGGAAGAAGCCTATCAATGTGAACTTGAGCAGCGACGCATAGATGAAATGTTCATGAAGGAAGCACTTTTGGAAGCCAAGAAGGCTGCTGATACATGGGAGGTACCTGTTGGTGCTGTTCTTGTGCAGCATGGGAAAATTATTGCTCGAGGCTGCAACTTAGTTGAAGAGTTACGGGACTCCACTGCCCATGCAGAGATGATTTGTATACGAGAAGCTTCAAAGCTTCTTCGATCATGGAGACTATCAGACACTACACTTTATGTAACGCTTGAGCCATGTCCAATGTGTGCTGGTGCTATCCTTCAGGCAAGAGTAGACACTGTTGTGTGGGGTGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGAATTTTCCCTGATGGAGGAGAAAATGTATCAGAACAAAGAGATATGCCACCTGCCCCAGTTCATCCATTCCATCCAAACATGAAAATAAGAAGAGGGGTCTTAGCCACTGAGTGTGCAGATGCAATGCAGCAATTCTTTCAGCTTAGAAGGAAAAAGAAGAAAGAGGAACCACCGAATGGCCCTTCTAGCCTTCCTGTTACTCACCACCCATCCAAGTTACTCAACAAGATACATGACGTCTTCCACATCATGTTCTGTTTGTAA 3990 0.4073 MSNAYVSSTIYAVRCKEPFSLSFNGYSNFCYERFDRTPSYCLSCCGCCDYCSVSTYRVPIKPCLINGLRQSALLQLSASRRLILGGGDHYLSRLPAYGVLRGCQELNSSVNERTDYSSSSRWRIKGRYIRAASQKGREFSHSFGSDGAEAVLSLLSEEADKDAICSKCKNASSSKRVEVDKRKNVSREKHLSSSEKVETEKKGILKRRESSSVDLRREYGKANQEREAFVKSESHRKRRDASSCSSYYSLSSGDFGSELEVQDEIGLEELSLEYEKDEANCLEEVKEEFNRQGDDSKKLQAVSNKGRIAFGVDIDWNLRNKSEKKLIEGTLQNTESIREQQDMHSREFRTHDSGHKKSSISQKRVNSEEDKSSFIDNLDKKANKAYIQTVNRRKHQSIDVQESGCDEVETTLLSQKKFSGREGKLEISETMLKETTDEYKKFVGSTSTTGKETLTSKKAFSGREGNLAISETLSQETNDKHKKIVGSTSTSGRDVIDRSSQKYSGNLKIEDTERTSNTRMKDMGVKKVSVLSSVQGVDKQKHQKGEKIITQMKDKEGRKKSEQFSEVSEAHKSNVEDTSSIKSRTRLKNMEEKSNISSDARVTLLQTDKRTTQSFQHRKGSELVSTLSEGYVSDEKQVSSSQKAYEKVRLIPKSKSTSLVRTRESSSQTDERIAKFELARDDQRSCNLSISDETNSREESSSQGSLSLISGAGKHSILASGEKRRSATMLIPSSSEMGGDSVQFELTAGIASPEIFLGTSESGSSALYDNSGRSSALHPDAIDLANRLEKSSRQFVDEFAERVMHEVTTSEAQEMEVTGTKLTLEVGGDQIYSSRQQGTQNDAQSKKHDSSRSSGFPGTKGPSDEMWDVMEPSVEQGQVAKETDISKETGKAVVTRTGRSLWGMIGDIVQLRWGSRAGSSTSAGRSAERNSPNKSDSDTWFSGQEHEETTKTNVLKKTSVPPQVMTSDKLKPGKHYTQSEGEVSDNTKLKDRGKHLEVGLSSPNTLESGSMSVGASHTSGEENVSGTEDKKDLKATTSGTQNMELPISVPARGPSIDGEIVSIGGSDMSGAESVVPIKESIAPVRSELSGSERKDGELKQRKFQRNRQVLRDRFDDWEEAYQCELEQRRIDEMFMKEALLEAKKAADTWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMICIREASKLLRSWRLSDTTLYVTLEPCPMCAGAILQARVDTVVWGAPNKLLGADGSWIRIFPDGGENVSEQRDMPPAPVHPFHPNMKIRRGVLATECADAMQQFFQLRRKKKKEEPPNGPSSLPVTHHPSKLLNKIHDVFHIMFCL 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01183 1329 MobiDBLite consensus disorder prediction 916 939 - -
Gma02g01183 1329 MobiDBLite consensus disorder prediction 539 595 - -
Gma02g01183 1329 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 875 1319 - -
Gma02g01183 1329 MobiDBLite consensus disorder prediction 916 1032 - -
Gma02g01183 1329 MobiDBLite consensus disorder prediction 337 372 - -
Gma02g01183 1329 MobiDBLite consensus disorder prediction 339 372 - -
Gma02g01183 1329 MobiDBLite consensus disorder prediction 176 203 - -
Gma02g01183 1329 Hamap tRNA-specific adenosine deaminase [tadA]. 1135 1292 IPR028883 GO:0002100|GO:0008251
Gma02g01183 1329 SUPERFAMILY Cytidine deaminase-like 1127 1296 IPR016193 GO:0003824
Gma02g01183 1329 CDD nucleoside_deaminase 1135 1242 - -
Gma02g01183 1329 MobiDBLite consensus disorder prediction 1001 1022 - -
Gma02g01183 1329 MobiDBLite consensus disorder prediction 1292 1311 - -
Gma02g01183 1329 MobiDBLite consensus disorder prediction 687 708 - -
Gma02g01183 1329 Gene3D Cytidine Deaminase, domain 2 1119 1301 - -
Gma02g01183 1329 MobiDBLite consensus disorder prediction 534 602 - -
Gma02g01183 1329 Coils Coil 267 292 - -
Gma02g01183 1329 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 875 1319 - -
Gma02g01183 1329 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1129 1251 IPR002125 -
Gma02g01183 1329 MobiDBLite consensus disorder prediction 834 867 - -
Gma02g01183 1329 Pfam MafB19-like deaminase 1132 1231 IPR028883 GO:0002100|GO:0008251
Gma02g01183 1329 MobiDBLite consensus disorder prediction 834 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01183 Gma-Chr2 13331878 13338400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01183 K11991 - gmx:100795980 2531.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01183 02 13331878 13338400 Gma02g01183 02 13331878 13338400 ECH