Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01030 ATGGCGATTTCCGGCGATCTCAGAGTCTCAGCAACACTTCCTCTGTATCGCTCCCACTCGCCTCCACTCCGAACCTCTTCTCAGTCTTCCCCAAAGGTAGACTTTCATCGTTTCTTGAACAGAGCTTGTAGCATCTCTGAATTCACTCCAAAATGCCCTTACCTGACAATTGTACGATGCAATATGCGTGGGTATTGCAAGCCAGTTGCTGCGGTCCTTGGAGGTCCTAAATTTACATCAAATTCAGTTAGCCAAGAAACCGAGAACTTTCTCCTTGATGCTGTTAAAATGAACTTCTTTGAGCGGTTAAATTTGGCTTGGAAGATAATTTTCCCATCGGCAACATCTAGAAAAAACTCCAATGCTAGGATTGCTAAGCAACGCTTGAAGATGATTCTGTTCTCTGATCGGTGTGAAGTAAGTGATGAGGCAAAGCGAAAAATTGTTAGCAATGTTGTGCGTGCTCTATCAGATTTTGTGGAAATAGAATCACAGGATAAAGTTCAGCTGAGTGTCTCTGCTGATACAGATCTTGGAACTATTTACTCTGTCACAGTGCCTGTACGGCGGGTTAAACCAGAATATCAAGAAATGGATGAATTTGGGACAATAACAAATGTTGAGTATAAGGACACCGGAGAGACTTCTGGTTCTGTTGATGTTACATTTGATTTCTATGTTCCAGACGAAAGAAGCATTTGTGAGCGGGAGAATTCAAATTTCAGCAAAGAGTTGTTTGTGTTCAGTTTCAAGTGCAAACAAAAAATGAAGGGAAATTGGTCGGAATTGGAGTTGGAGAAGGAATTCGGAGACGCCATTTCCCGAACCCGTTTCGCGCCCCACTCCAACAACCTTCTCATCTCTTCTTGGGACTCCAATCTTCGCCTCTACGACGTCGACGCCTCCCTCCTCAGACTCCAAGCTCCCTCGCAAGCTCCTCTTCTCGATTGCTGCTTCCAGGACGACGCCGTCGCTTTCGCCGCCGCCTCTGATGGACTAATCCGAAGGTATGACTTGCATTCAGGACTTGTTGATACAGTGGGTAGGCACGATGACATGGCAATGTTTATTGGATATTCCAATGAAACATGTCAGTTGGTCACATCCGGATTTGACAAGAAGTTACTGTTATGGGACATGCATACGAAGAAGACTTCTTTATGTTTGAGAAGTCTAGATGCAGAGGTAGACTCCATGTCTGTCTCTGGGTTTAATGTTACCATAGCCATTGGAGCATCAATGCATGTTTATGATTTACGTTACTTTGACCAACCAGTTGAGTCAAAAGAGGCATTCAATGGAACACACTTAAGATGTGTCAGTTCAATTCCAGATGCAGAAGGATTTGCAGTTGGGTCTGTAGATGGACGAGTATCACTGCAGATTTCCTATCCATCCGGTTCAGATGAAATTAGatatatattccggtgtcatccaaaatcaaaggatggaaggcattatttggtatcagtgaatgacattgcattcagtccactTGTATCCGGTGCTTTTGCCACTGGTGATAATGAAGGTTATGTTACCATATGGGATGCTGGAAGTAGGAGAAGACTAGTTGAGTTGCCCAGATACCCAAATAGTGTTGCATCCTTATCATACAACCACACGGGACAGCTTCTGGCAGTTGCATCAAGCCATACTTACCAAGAAGCAAAGGAAATAGAAAAACCACCTCTAAGAGAAGTTAAAGTACTTATGCTATGCTTGCCAACGAAGATTTGTGTACATCGTCGGAGACACAAGTGGAGGCACCGGTGA 1776 0.4212 MAISGDLRVSATLPLYRSHSPPLRTSSQSSPKVDFHRFLNRACSISEFTPKCPYLTIVRCNMRGYCKPVAAVLGGPKFTSNSVSQETENFLLDAVKMNFFERLNLAWKIIFPSATSRKNSNARIAKQRLKMILFSDRCEVSDEAKRKIVSNVVRALSDFVEIESQDKVQLSVSADTDLGTIYSVTVPVRRVKPEYQEMDEFGTITNVEYKDTGETSGSVDVTFDFYVPDERSICERENSNFSKELFVFSFKCKQKMKGNWSELELEKEFGDAISRTRFAPHSNNLLISSWDSNLRLYDVDASLLRLQAPSQAPLLDCCFQDDAVAFAAASDGLIRRYDLHSGLVDTVGRHDDMAMFIGYSNETCQLVTSGFDKKLLLWDMHTKKTSLCLRSLDAEVDSMSVSGFNVTIAIGASMHVYDLRYFDQPVESKEAFNGTHLRCVSSIPDAEGFAVGSVDGRVSLQISYPSGSDEIRYIFRCHPKSKDGRHYLVSVNDIAFSPLVSGAFATGDNEGYVTIWDAGSRRRLVELPRYPNSVASLSYNHTGQLLAVASSHTYQEAKEIEKPPLREVKVLMLCLPTKICVHRRRHKWRHR 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01030 591 Pfam Septum formation topological specificity factor MinE 122 189 IPR005527 GO:0032955|GO:0051301
Gma02g01030 591 SUPERFAMILY WD40 repeat-like 265 551 IPR036322 GO:0005515
Gma02g01030 591 ProSiteProfiles Trp-Asp (WD) repeats profile. 347 388 IPR001680 GO:0005515
Gma02g01030 591 PANTHER MITOTIC CHECKPOINT PROTEIN BUB3.3 262 565 - -
Gma02g01030 591 Gene3D Cell division topological specificity factor MinE 108 188 IPR036707 GO:0032955|GO:0051301
Gma02g01030 591 PANTHER MRNA EXPORT FACTOR AND BUB3 262 565 - -
Gma02g01030 591 Gene3D - 238 577 IPR015943 GO:0005515
Gma02g01030 591 SMART WD40_4 468 517 IPR001680 GO:0005515
Gma02g01030 591 SMART WD40_4 300 338 IPR001680 GO:0005515
Gma02g01030 591 SMART WD40_4 262 298 IPR001680 GO:0005515
Gma02g01030 591 SMART WD40_4 340 379 IPR001680 GO:0005515
Gma02g01030 591 ProSitePatterns Trp-Asp (WD) repeats signature. 366 380 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01030 Gma-Chr2 11146894 11158520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01030 K02180 - gmx:112997601 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01030 02 11146894 11158520 Gma02g01030 02 11146894 11158520 ECH