Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00974 ATGGTTCTTCTCAACTTTGGTGAGAGGCTATACTCAGGACTGGTTGCCACCATGACTGCTCATCTAAAAGAGATAGCTAGATCTATTGAAGCCACTCAAGAGGGTTCCTTTCTGGAAGAAATGAACAGAAAATGGAATTCTCACAATAAGGAATTACAATTGATTGGAGACATTCTGATGTACATGGATAGGACTTACGTCCCAAAAAACGGGAAAATCTCTGTTCACGAACTTGGCCTTAAACTGTGGAGAGAAAATGTTATATGTTCAAACCAGATAAGGACCCGACTGTTAAATACACTTTTGGAAATGGTGTGCAGTGAACGTGCAGGTGAAGTTATTAACAGAGGACTGTTTAGAAATATAACAAAGATGCTAATGGATTTAGGTCCTTCTGTTGTTTATGGGGAAGAATTTGAGACTCATTTTCTTCAAGTTTCAGCTGAGTTCTACCAGTTAGAATCCCAGAAGTTTATTGAGTGTTGTGCTTGTGGGGATTATCTGAAGAAAGCTGAGAGTTGTCTGAAAGAGGAAATGGATAGAGTGAGCCATTACTTGGATCCCAGTACTGAAAAGAAGATTACTGATGTGGTGGCTAAGGAGATGATTGAAAATCACATGCTTACATTAATACATATGGAGAATTCAGGGTTAGTAAGCATGCTTTGTGAGGATAAATACGAAGATTTGGGTCGAATGTATAACTTGTTCTGCCGTGTTACTGATGGTCTAGCAAAAATACTTGAAGTGATGACTTCACACATTAGAGAGTCGGGTAAAAAGCTTGTCACGGATCCTGAAAGGTTGAAGGATCCTGTTGAATTTGTGCAGAGGCTCTTAGATGAGAAACATAAGTATGACAAGATTATAAATTTTGCATTTAACGACGATAAGTTGTTCCAAAATGCTTTCAAATCCTCCTTTGAATACTTCATTAACTTGAATCCCCGTTCTCCAGAGTTCATTTCACTCTTTGTAGATGATAAGCTTCGGAAAGGTCTGGAGGGAGTTAGAGAGGATGATGCGGAGATTGCTCTTGACAAGGCGATGATGCTATTCCGGTACTTGCGAGAAAAAGACATGTTTGAGAAGTATTACAATCTGCATATGGCAAAGCGGCTTTTGTCGGGAAAAACAGTTTCTGATGATGCAGAAAGAAGTCTCATAGTCAGGCTCAAGACCGAATGCGGTTATCAATTCACCTCTAAATTAGAGGGCATGCTTACCGACATGAAAACCTCTCTAGAAACAATGCAGGGCTTTTATGCCAGCCACCCTGAGTTAAGTGACAGTCCTACACTTACCGTGCAGGTTTTGACCTCAGGGTTTTGGCCTACTCAATCTACTGTTATATGTAATCTGCCAGCTGAATTATCTGCACTTTGTAAGAAGTTTCGGTCCTATTACCTCGACACACATACTGACGGGAGATTGTCCTGGCAAACTCATATGGGCACAGCAGACATTAAAGCCACCTTTGGTAAAGTTCGCAAACATGAGTTAAATGTCTCCACTTACCAAATGTGTGTCCTCATGCTGTTCAATACTGCTGATAGACTAGGCTACAAGGAAATTGAGCAAGCAACTGAGATTCCGGCTTCGGCTCTGAAGAGGTGTCTGCAATCATTGGCTTTGGTTAAGGGAAGAAATGTGCTTAGGAAGGAGCCCATGAGTAAAGATGTAGATGAGGATGATGCTTTCTTTGTAAATGACAAGTTCAGTAGCAATCTATACAGGGTAAAAATAGGAACTGTAGTTGCACAAAATGAATCAGAACCTGAGAAACTGGAGACTCATCGGCAACAAGTGGAGGAGGAGGGCCGAAGGTCCCAGATTGAGGCTGTCATAGTGAGGATAATGAAATCAAGAAAGAAACTTGATCACAGCAATCTCATGGCTGAGGTCACAGAGCAGTTCCATGCAAATCCCACAGAGGTAAAGAAACGGATTGAGTCTCTTGTTGACCGGGAATTTATGGAACGAGATGATAATGACAGACAGTTATATCGATATCTTGCCTAG 2022 0.411 MVLLNFGERLYSGLVATMTAHLKEIARSIEATQEGSFLEEMNRKWNSHNKELQLIGDILMYMDRTYVPKNGKISVHELGLKLWRENVICSNQIRTRLLNTLLEMVCSERAGEVINRGLFRNITKMLMDLGPSVVYGEEFETHFLQVSAEFYQLESQKFIECCACGDYLKKAESCLKEEMDRVSHYLDPSTEKKITDVVAKEMIENHMLTLIHMENSGLVSMLCEDKYEDLGRMYNLFCRVTDGLAKILEVMTSHIRESGKKLVTDPERLKDPVEFVQRLLDEKHKYDKIINFAFNDDKLFQNAFKSSFEYFINLNPRSPEFISLFVDDKLRKGLEGVREDDAEIALDKAMMLFRYLREKDMFEKYYNLHMAKRLLSGKTVSDDAERSLIVRLKTECGYQFTSKLEGMLTDMKTSLETMQGFYASHPELSDSPTLTVQVLTSGFWPTQSTVICNLPAELSALCKKFRSYYLDTHTDGRLSWQTHMGTADIKATFGKVRKHELNVSTYQMCVLMLFNTADRLGYKEIEQATEIPASALKRCLQSLALVKGRNVLRKEPMSKDVDEDDAFFVNDKFSSNLYRVKIGTVVAQNESEPEKLETHRQQVEEEGRRSQIEAVIVRIMKSRKKLDHSNLMAEVTEQFHANPTEVKKRIESLVDREFMERDDNDRQLYRYLA 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00974 673 PANTHER CULLIN-3A-RELATED 1 673 - -
Gma02g00974 673 SMART cul_2 347 493 IPR016158 -
Gma02g00974 673 Pfam Cullin protein neddylation domain 608 665 IPR019559 -
Gma02g00974 673 Gene3D Cullin; Chain C, Domain 2 431 588 - -
Gma02g00974 673 Gene3D Cullin Repeats 316 426 - -
Gma02g00974 673 Gene3D - 602 673 IPR036388 -
Gma02g00974 673 Gene3D Cullin Repeats 1 85 - -
Gma02g00974 673 Gene3D Cullin Repeats 208 315 - -
Gma02g00974 673 Pfam Cullin family 3 573 IPR001373 GO:0006511|GO:0031625
Gma02g00974 673 ProSiteProfiles Cullin family profile. 317 544 IPR016158 -
Gma02g00974 673 SUPERFAMILY Cullin repeat-like 4 319 IPR016159 -
Gma02g00974 673 PANTHER CULLIN 1 673 IPR045093 -
Gma02g00974 673 SUPERFAMILY "Winged helix" DNA-binding domain 590 673 IPR036390 -
Gma02g00974 673 SUPERFAMILY Cullin homology domain 311 583 IPR036317 -
Gma02g00974 673 SMART Cullin_Nedd8_2 604 667 IPR019559 -
Gma02g00974 673 Gene3D Cullin Repeats 87 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00974 Gma-Chr2 10381312 10383333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00974 K03869 - gmx:100782923 1334.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00974 02 10381312 10383333 Gma02g00974 02 10381312 10383333 ECH