Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00874 ATGTTTTTTTGCAGAGTTGCTGTGGATAACATTTCAAGCAGAACAGACACTGTGATAAAGGTTGATAGCGCGAACAAGCGTGGGAGCTTGTTGGAGGTGGTTCAGGTTCTTACTGATATGAATCTCAGTGTTAGAAGAGCTTATATTTCCTCTGATGGAGAATGGTTCATGGATGTTTTTCATGTCACGGATCCAAATGGGAAAAAGTTTATGCAAGATGATGTAGCTGACCGCATTCAACAGTCACTGGGTCCAAGAGCCTCTAGTTTTCGATCCTTGAGAAGGTCTGTTGGGGTTCAAGCTGAAGCAGAACATACAACCATTGAATTAACTGGAAGAGACAGGCCAGGATTGCTCTCGGAAGTGTTTGCTGTTCTTGCAGACCTCAAATGCAATGTGGTAGCAGCAGAAGTCTGGACCCACAATTCAAGAATGGCATCTGTTGTTTACATCACAGATGAGGCGACGGGATTGTCCATCGACGATCCGGATCGCCTTGCCAAGATTAAGCAGCTTCTACTGTATGTGCTGAAAGGAGACATAGATAAGAAGAGCGCCAACACTGCTGTTTCTGTTGGTTCTACTCACAAGGATAGGAGGCTGCATCAATTGATGTACGCTGACCGCGATTATGACGTAGATGATGGGGATTCTGGGTCAACAAGTGACAGGAATAAGCTCCTTGTAACTGTTGATGATTGCATAGATAAGGGATACACTGTTGTGAACTTGAGGTGTCCAGACAGACCAAAGTTACTGTTTGATACCGTGTGTACACTCACAGATATGCAGTATGTTGTGTACCATGGAACTGTCATTGCTGAAGGACCAGAGGCATATCAGGAATATTATATAAGGCATGTGGATGGAAGTCCTATCAGTTCTGAAGCAGAAAGGCAAAGAGTGATTCATTGTTTGGAGGCTGCTATTAGGAGACGAACTTCTGAGGGCATAAAGCTAGAACTATGTGGGGAAGACAGGGTTGGCCTTCTGTCTGATGTAACTCGCATCTTTAGAGAAAATGGTCTTTCAGTCAACCGTGCTGAAGTTACAACCAGGGGCACCCAAGCCATGAATGTTTTCTATGTGACTGATGTATCTGGAAATCCAGTTAATAGTGAAACAATTGAAGCAGTTCGAAAAGAGATTGGCTTGACTATACTGCATGTAAAAGATGATGTCTGCTCAAAACCTCCACCCCAAGAGAGTGGAAAATTCTCTTTGTCTAATCTCTTTCGGTCAAGCTCTGAGAAATTTCTCTACAACTTGGGCCTGATGAAGTCTTATTCTTGA 1293 0.4354 MFFCRVAVDNISSRTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFHVTDPNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQLMYADRDYDVDDGDSGSTSDRNKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAERQRVIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRGTQAMNVFYVTDVSGNPVNSETIEAVRKEIGLTILHVKDDVCSKPPPQESGKFSLSNLFRSSSEKFLYNLGLMKSYS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00874 430 PANTHER OS08G0515400 PROTEIN 4 428 - -
Gma02g00874 430 Gene3D - 317 391 - -
Gma02g00874 430 CDD ACT_ACR_2 106 179 - -
Gma02g00874 430 ProSiteProfiles ACT domain profile. 319 397 IPR002912 -
Gma02g00874 430 SUPERFAMILY ACT-like 104 174 IPR045865 -
Gma02g00874 430 ProSiteProfiles ACT domain profile. 18 98 IPR002912 -
Gma02g00874 430 SUPERFAMILY ACT-like 315 384 IPR045865 -
Gma02g00874 430 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 428 IPR040217 -
Gma02g00874 430 SUPERFAMILY ACT-like 15 84 IPR045865 -
Gma02g00874 430 ProSiteProfiles ACT domain profile. 107 184 IPR002912 -
Gma02g00874 430 CDD ACT_ACR_3 239 313 - -
Gma02g00874 430 Pfam ACT domain 17 66 IPR002912 -
Gma02g00874 430 Pfam ACT domain 106 154 IPR002912 -
Gma02g00874 430 Pfam ACT domain 321 381 IPR002912 -
Gma02g00874 430 CDD ACT_ACR_4 317 388 - -
Gma02g00874 430 Gene3D - 105 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00874 Gma-Chr2 8795849 8798229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00874 - - gmx:100798999 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00874 02 8795849 8798229 Gma02g00874 02 8795849 8798229 ECH