Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00872 ATGAGGCAAGAGAACATAATGCATTACCACCAAGTGGAGCCTGCTGCATGGAGCTACTACATGAGGGTTCATCGGAGCATGGAAGAGGACCAGATGGAGAGAGTTGCAAGGCTGGCCTCACAGAGTGCAGTAGTGATATTCAGTGTGAGTAGCTGTTGCATGTGCCATGCAATGAAGAGGCTCTTCTGTGGGATGGGGGTTAACCCTACGGTGCATGAGCTTGACCAAGACCCCAAAGGGAAAGATATGGAAAGAGCACTCATGAGGCTCCTTGGAATTGGAATCAACTCAACTTCTTCTGCTGTTCCTGTGGTCTTCATTGGAGGGAAACTTGTTGGCCCCATGGACAGGGTTTTGGCTTTCCACATCAGTGGCACCCTTGTTCCTCTTCTCAAACAAGCTGGTGCCTTGTGGCTTTGA 420 0.5 MRQENIMHYHQVEPAAWSYYMRVHRSMEEDQMERVARLASQSAVVIFSVSSCCMCHAMKRLFCGMGVNPTVHELDQDPKGKDMERALMRLLGIGINSTSSAVPVVFIGGKLVGPMDRVLAFHISGTLVPLLKQAGALWL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00872 139 SUPERFAMILY Thioredoxin-like 32 138 IPR036249 -
Gma02g00872 139 TIGRFAM GlrX-like_plant: glutaredoxin-like family 35 139 IPR011905 -
Gma02g00872 139 CDD GRX_GRXh_1_2_like 43 130 - -
Gma02g00872 139 Pfam Glutaredoxin 44 112 IPR002109 -
Gma02g00872 139 PANTHER GLUTAREDOXIN-C1 PROTEIN 7 138 - -
Gma02g00872 139 PANTHER GLUTAREDOXIN 7 138 IPR011905 -
Gma02g00872 139 ProSiteProfiles Glutaredoxin domain profile. 32 138 - -
Gma02g00872 139 Gene3D Glutaredoxin 21 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00872 Gma-Chr2 8775010 8775429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00872 29 139 Miscellaneous Gene Families AT3G02000 66.667 1.51e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00872 K03676 - gmx:100797942 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00872 02 8775010 8775429 Gma02g00872 02 8775010 8775429 ECH