Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00742 ATGTCTACAGAGGAAGAGAGTGCGGTGAAGGAGCCTTTGGATCTCATTAGGCTCAGCCTCGACGAGCGTATCTATGTCAAACTCCGTTCCGACAGAGAGCTTCGTGGCAAACTTCACGCTTATGATCAGCATCTTAATATGATTCTTGGCGATGTTGAAGAAATCATTACTACAGTGGAAATCGATGATGAGACATACGAAGAAATTGTGAGGACTACAAAGCGGACAGTTCCTTTCCTGTTTGTCAGGGGAGATGGGGTGATATTGGTTTCCCCGCCATTGAGGACCGCATGA 294 0.466 MSTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00742 97 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 1 97 - -
Gma02g00742 97 Gene3D - 2 94 - -
Gma02g00742 97 Pfam LSM domain 16 92 IPR001163 -
Gma02g00742 97 CDD LSm3 11 92 IPR034105 GO:0000398|GO:0003723
Gma02g00742 97 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 1 97 IPR040002 GO:0003723
Gma02g00742 97 SUPERFAMILY Sm-like ribonucleoproteins 11 93 IPR010920 -
Gma02g00742 97 SMART Sm3 14 92 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00742 Gma-Chr2 7203744 7206696 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00742 K12622 - pvy:116143379 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01498 16 34403291 34406288 Gma02g00742 02 7203744 7206696 GST