Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00540 ATGATCCTAATCTACTACCTCTCGGAGCACCCGGCTATCGTGGGCTTCCGGTGGAGCCACGCCCAATCATGGGGAGCCACCTGGtccttcctcttcacctcaatcgcctcctacctcttcctctcaatcctcctccacctctctctttctctcctcttccgccgccgtcaaatccctcttggcccattccccgccgtccacagcctctccatgtccctcgtctccgccacgatcttcgccggcatcctcctctcttccgccgccgagatccgcgacacgcggtggttctggccgcgctccaaaacccccttacagtggctcctctgcTTCCCCCTCGGCACGCGCCCCTCGGGGCGCGTGTTCTTCTGGTCCTACGTCTACTACCTCTCCCACTTCCTCCACATGTTCCGCACTCTCCTCACAATCGTACGCCACCGCAGGCTATCCTTTTTTCATCTGCTTAGCCACTCAATCTCCGCCTTCGCCTCCTTTCTCTGGCTCGAGTTCTCGCAGTCCTTCCAGGTTCTAGCGATCCTCTTCGCCACGCTCGTCTACGCCGTCGTCTACGGCTACCGCTTCTGGACCGCCATCGGCCTCCGTGGCGCCTGCTTCCCCTTCGTCCTCAGCTGCCAGATCGCGCTCCTGGCATGCAATATCGCCTGCCACGTCGCCGTCTTCTTCCTCCACTTCTTCCTCAAAGGCGGGTGCAACGGCATCGGCGCGTGGCTCTTCAACTCAATCCTAAACCTCGCGCTTCTCATGCTCTTTCTTAACTTCTACGTCAGAATGCACGTGGTTCACAAGAGGAGGAAAGTTAGGGATGTTGTCGTTGCTCCTGCACTGTCTTAA 849 0.4146 MILIYYLSEHPAIVGFRWSHAQSWGATWSFLFTSIASYLFLSILLHLSLSLLFRRRQIPLGPFPAVHSLSMSLVSATIFAGILLSSAAEIRDTRWFWPRSKTPLQWLLCFPLGTRPSGRVFFWSYVYYLSHFLHMFRTLLTIVRHRRLSFFHLLSHSISAFASFLWLEFSQSFQVLAILFATLVYAVVYGYRFWTAIGLRGACFPFVLSCQIALLACNIACHVAVFFLHFFLKGGCNGIGAWLFNSILNLALLMLFLNFYVRMHVVHKRRKVRDVVVAPALS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00540 282 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 3 272 IPR002076 GO:0009922|GO:0016021
Gma02g00540 282 Pfam GNS1/SUR4 family 27 270 IPR002076 GO:0009922|GO:0016021
Gma02g00540 282 PANTHER ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE 3 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00540 Gma-Chr2 5377779 5379150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00540 3 249 Acyl Lipid Metabolism Gene Families AT4G36830 66.534 1.53e-116 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00540 - - gmx:100787513 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00540 02 5377779 5379150 Gma02g00540 02 5377779 5379150 ECH
Gma02g00540 02 5377779 5379150 Gma16g01302 16 31667389 31668587 ECH
Gma16g01302 16 31667389 31668587 Gma02g00540 02 5377779 5379150 GST
Gma11g00582 11 4881364 4882610 Gma02g00540 02 5377779 5379150 PCT
Gma02g00540 02 5377779 5379150 Gma11g00582 11 4881364 4882610 PCT