Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00468 ATGTGTTCTCTTCGTCTTCACCTATTCCTTTTAGTGGCAGCTTCAACAAGCTCATTATTCGAATCCGCAACAACACACTGGAGCGACAAGCAGGCTCTGAAAGACCTAAAGAACAACCTCGACCCTTCCTCCATAACTCCAGGCTCGTGCCTTTATTCATGGGACTTCTCCCTCGACCCCTGCGACAACCTCTTCAGCGACAACTTCACCTGCGGCTTCAGGTGCGACGCCGTCGTTTCGGGAGCCACCCGCGTCACCGAACTCGCCCTCGACCCAGCTGGTTACACGGGCCCACTCGTCATAAACCACCACAACAACCTCCCATTCCTCCAAAGCCTCGACCTTTCCAACAACTACTTCTCAGGCCCAATCCCCGACTCACTATCCAACTTAACTCGCTTAACTCGACTCGGTCTGTCCAAAAACTCCTTCTCAGGCCCAATCCCTTCTTCCCTCGGTTCCCTTATAAACCTTCAAGAGCTCTACCTCGACAACAACAACCTTAACGGAACTCTCCCCGTTAGTTTCGACGGCCTCACAAACCTCAAACGCCTCGAACTCCAGTCCAACTCCCTAAACGGTGTCCTTCCCGATCTAACCTCTCTGAAAAATCTTTACTTTTTGGACCTCAGTTTTAATTCCCTCACCGGAGGTTTTCCCTCGAACTTGCCAGATTCGTTGGTGCAGATTTCCATCCGCAACAACAGCTTAAACGGTGCGTTTGAATCTGATGCCTTGAAAAGCTTCTCCTACTTGCAAGTCTTGGATTTGAGCTCGAACAGGCTCAATGGCTCCCTGCCGTTGAGCTTGTTCGAGCTCCCGTCCTTGCAACAACTGACTCTATCATTCAACGGGTTTTCCGGGATCAAACCGCCATCGTTTGCTTTTGACGGTGGCGTCGCCGTCCCAAGCGAGCTGATAGCAGTTGATCTGAGTAACAACGAGCTAGGGGGGTTTCTGCCGATGTTTTTCTCGTTAATGCCGAAGCTTTCGTCTTTGTCGTTGGAGAATAACAAGTTTGTCGGAATGATACCGACCCAGTATGCGTTGAAGACGGTTTTTCCCGAACCGGGGGTGGAACCGTTCGAGAGGCTTTTGTTGGGGGGGAACTACTTGTTCGGAGGGATTCCAAGTGCGCTAATGGCGCTTGAACCGGGTTCTGCCAACGTCAGGCTTGTGGATAATTGCTTCTATAGGTGTCCTCTTAGTTTCTTCTTTTGTCAGGGTGGGGAACAGAAGTCTTACGAAGAGTGTAAGAGGTTCAGCCACTTCATCCCTTAG 1281 0.5082 MCSLRLHLFLLVAASTSSLFESATTHWSDKQALKDLKNNLDPSSITPGSCLYSWDFSLDPCDNLFSDNFTCGFRCDAVVSGATRVTELALDPAGYTGPLVINHHNNLPFLQSLDLSNNYFSGPIPDSLSNLTRLTRLGLSKNSFSGPIPSSLGSLINLQELYLDNNNLNGTLPVSFDGLTNLKRLELQSNSLNGVLPDLTSLKNLYFLDLSFNSLTGGFPSNLPDSLVQISIRNNSLNGAFESDALKSFSYLQVLDLSSNRLNGSLPLSLFELPSLQQLTLSFNGFSGIKPPSFAFDGGVAVPSELIAVDLSNNELGGFLPMFFSLMPKLSSLSLENNKFVGMIPTQYALKTVFPEPGVEPFERLLLGGNYLFGGIPSALMALEPGSANVRLVDNCFYRCPLSFFFCQGGEQKSYEECKRFSHFIP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00468 426 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 423 - -
Gma02g00468 426 Pfam Leucine Rich Repeat 110 131 IPR001611 GO:0005515
Gma02g00468 426 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 423 - -
Gma02g00468 426 Pfam Leucine rich repeat 226 285 IPR001611 GO:0005515
Gma02g00468 426 Pfam Leucine rich repeat 157 215 IPR001611 GO:0005515
Gma02g00468 426 Gene3D Ribonuclease Inhibitor 198 419 IPR032675 -
Gma02g00468 426 SUPERFAMILY L domain-like 66 408 - -
Gma02g00468 426 SMART LRR_typ_2 107 131 IPR003591 -
Gma02g00468 426 SMART LRR_typ_2 155 178 IPR003591 -
Gma02g00468 426 SMART LRR_typ_2 202 230 IPR003591 -
Gma02g00468 426 SMART LRR_typ_2 179 201 IPR003591 -
Gma02g00468 426 SMART LRR_typ_2 273 298 IPR003591 -
Gma02g00468 426 Gene3D Ribonuclease Inhibitor 26 197 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00468 Gma-Chr2 4685558 4686838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00468 106 384 Receptor kinase-like Gene Family AT5G56040 33.451 8.62e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00468 - - gmx:100787530 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00468 02 4685558 4686838 Gma02g00468 02 4685558 4686838 ECH